Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1578 ATGTCGAATCGATCCAGTGAGGGTAGACAACATGACAATAACAAGGGTTTCCCCAAAACACATAACCAGAAGAAATTCGTCCCCAAAAATCAAAATCCAACCCTCTCAACCTCACTCAGACAAACACAAACACAAACACAACCATCTCAATCCACCACTACCAGTAGCAGACTCCCACTCCCAAACAGAGGCCAGAATGGGAATTTCGTTAAATACTTACCACAGGACGAGGCCGTGGCAGCGGGTCTCCGTGCCGAGGATGGAGCATTGGATCCCCTCGAATCTCAGAGAGTCGTAGATCTTTTGAACACACACTTGTCACGCTTGCTCAAGTTCAAACCCAAGGATTTCTGGACACAAGTGGCTACTGACACCTCACTGCATGAGTTTTTGGACAGCTTCTTGCAATTCAGGAGCAGGTGGTATGATTTCCCTCATCGCGGGCTGAAAGGGATTGTTGCTGGTGTTATCGTTGGAGAGCTCGAGTTGATTCGCCGCGTTTTCATGGTATTGTATCGCATTTCTTCGAATAAAGACCCCGGTGCTCGACCGGCCGATGCCCTCAGTTTGAGAGACCATGAAGGCAGAGATTGGACTCACACTGGAACAATGTTTTTGTACATTTTCCATAAATGTTATGTGTATATAAAAAATTCCATTGCAGATTCGTGTTATGTTAGAAATGCTTTGAATGCTCAGCCTTGGATCCATAATAATCTGACTGCAGTAATATCCCATTTTCTAGGAATTGTCAGCACAATGCATGAGCGTTGTAGTTCATCATTGGAGGTCTTATTTTCTTCTGGAAATCTTGATCACCATAATGCTGCTTTTCTTCAAGCTGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGACTCTTTTGTCAGTGCATATGAACCAGCAGCTGTTTTCTTCGCTTGCCCAATTGAAATGAGTTATGGGAATGAGGAACTGCTGAGCCTCCTTGCCAGATTGCATGATTCACTAATTCCATCATTGCAAAAAGGATTCCGTATGATTTTTGCTGACAAACAAGATGGCACAGTATCTAATATCTTAGTAAGTTTGAAGATGTTAAAAATCAGATTGGTAAAGTTTGGTTGGCAACTATTGCACTTGTGCTATCTAAGTGATGATGTGTTCAGAGATAGCATCCCTCTTCCAGCTGCCACAAAGATGTTTCCTGCCAATGTAGAGGACCCAGTCATCAGAGCAGATATTCTGGTTCAAACATTTAGAGAGATCAATTCAGTATCATTACAGTCTCAGGAAAGTCATCAGAAGGAAACATTTCTTCAAGATGTTGAAATAAATTTCAATATACTAAGCGGGATTGAGAGATTAAAGGATAGTGGATGGATATTCATTGATGATGAACAGTTTCAATATATATCTGGAATGTTGAGTTCTGTGAAAGAGATTTATAAGGAGCCGTATTCTGCCTCAACCCCTGCACCAAACCAAACATTGCTGATGGATGAAGATGCTGCAATTTCAGAGTCAAACATCAGTCAAATTAGGGACCTGTTCCCTGATTATGGTAAAGGTTTTTTAGCTGCGTGTCTTGAGGTCTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATAAAGATCTGCAGAACCTGGACACCTCTCTAGAGACATTGCCACCAGCCAAGCCTACCACTGTGGGTGGGAATGATAAAGGAAAAGGTAAATTAATTGATTCTATGTCAGCATCCTCAAATCCAGAAGTTGTTAGGGGGAAGCAACAGACACAGGGGCCAGTGATGCCATCCTCTCCTTCACTAGGAAAATTTGTACGGAAAGCTAGAGCTGACTTGCCTGATCTCAGTATTCTGGATAAAAAGGATGAAAAGGATACATCAAAATCTGCTGCTATGATTTTACAATATGAATATGAAGATGAGTATGATGACTCTTTTGATGACTTGGGTCTGAGTGTAGCAGACTCTGGAGTAGAAGAAAATGAGGCACTGAGTGACAAAATAAACGCAACTTCAGGGAAATCATGGGCAGCAGAGAGTGGAAACCCTGTAAAAAATGCCCCTGATTCAAAATGGGGCTCCAGGAAAAAGCCGCAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCTGGTGCAGTCGCAGTGGCAAATTCTGACGAAGCTTCACTAGTAACGCAAGTTCAGAAAGAATTAATACATGGCCTTGGACGTGGAGGCAACCTTCCTCTTGGTGCGGTGAAGAAGTTCACAGATTCCTACAGGGAGAATGATAACCAACCCCAGGTTTCTGAAATGGAAGGGAGAGGGATTGTGGGCAATACGTTTGGTAGGGGAAGGAAGGAAGCTGGAAAACAAATTACATCTCATCAGCAAAAGGAGAACCAATCTGATGATAATTCCGAGGTGGATGGAAATAATCAAAGAGGGAGAGGGAGAGGAAGAGGGAGGGGAAGGGGAGGTGGAGGAGGAAGAAACAATCACCACCAGAAGGACCGAGCCATGAAGAAGCATTTCTCTGGAATGAGTGGTTATTAA 2568 0.4283 MSNRSSEGRQHDNNKGFPKTHNQKKFVPKNQNPTLSTSLRQTQTQTQPSQSTTTSSRLPLPNRGQNGNFVKYLPQDEAVAAGLRAEDGALDPLESQRVVDLLNTHLSRLLKFKPKDFWTQVATDTSLHEFLDSFLQFRSRWYDFPHRGLKGIVAGVIVGELELIRRVFMVLYRISSNKDPGARPADALSLRDHEGRDWTHTGTMFLYIFHKCYVYIKNSIADSCYVRNALNAQPWIHNNLTAVISHFLGIVSTMHERCSSSLEVLFSSGNLDHHNAAFLQADLLEVMDFINDAIVSMDSFVSAYEPAAVFFACPIEMSYGNEELLSLLARLHDSLIPSLQKGFRMIFADKQDGTVSNILVSLKMLKIRLVKFGWQLLHLCYLSDDVFRDSIPLPAATKMFPANVEDPVIRADILVQTFREINSVSLQSQESHQKETFLQDVEINFNILSGIERLKDSGWIFIDDEQFQYISGMLSSVKEIYKEPYSASTPAPNQTLLMDEDAAISESNISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEGTLHKDLQNLDTSLETLPPAKPTTVGGNDKGKGKLIDSMSASSNPEVVRGKQQTQGPVMPSSPSLGKFVRKARADLPDLSILDKKDEKDTSKSAAMILQYEYEDEYDDSFDDLGLSVADSGVEENEALSDKINATSGKSWAAESGNPVKNAPDSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSDEASLVTQVQKELIHGLGRGGNLPLGAVKKFTDSYRENDNQPQVSEMEGRGIVGNTFGRGRKEAGKQITSHQQKENQSDDNSEVDGNNQRGRGRGRGRGRGGGGGRNNHHQKDRAMKKHFSGMSGY 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1578 855 MobiDBLite consensus disorder prediction 582 605 - -
Aed4g1578 855 MobiDBLite consensus disorder prediction 1 69 - -
Aed4g1578 855 MobiDBLite consensus disorder prediction 24 63 - -
Aed4g1578 855 MobiDBLite consensus disorder prediction 822 845 - -
Aed4g1578 855 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 12 854 - -
Aed4g1578 855 MobiDBLite consensus disorder prediction 582 609 - -
Aed4g1578 855 MobiDBLite consensus disorder prediction 766 855 - -
Aed4g1578 855 ProSiteProfiles CUE domain profile. 504 547 IPR003892 GO:0043130
Aed4g1578 855 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 12 854 - -
Aed4g1578 855 CDD CUE_ASCC2 506 545 IPR041800 -
Aed4g1578 855 SMART cue_7 504 546 IPR003892 GO:0043130
Aed4g1578 855 MobiDBLite consensus disorder prediction 805 821 - -
Aed4g1578 855 MobiDBLite consensus disorder prediction 680 702 - -
Aed4g1578 855 Pfam CUE domain 506 546 IPR003892 GO:0043130
Aed4g1578 855 Gene3D - 505 547 - -
Aed4g1578 855 SUPERFAMILY UBA-like 506 561 IPR009060 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1578 K18667 - gmx:100778129 1370.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1578 4 20589100 20600373 Aed4g1578 4 20589100 20600373 ECH