Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1573 ATGGACCCATCTATAGTGAAGCTTCTGGAAGATGACGAGGATGAAACTATGCATTCAGGGGCAGATGTGGAAGCATTCCAGGCTGCATTAAATAGAGACTTAGGAGGAGATACTTCAACTTCTCAGCTGTCTGGTTCAGACACAGGAAGCAATAATTCATTGAGCCAGTCGTTACCAAAGTGGCCAACTTCTAGCCATGACAACCAAACTGATTGTCAAAATCAAGAGCCTAAAGATGTGCAGCAGCAAGAGCAACAACATTCGTCTGAAATGGAGCAGAAGCAACAACAACCTCTTGTTGAGCAACTACAAAATGTTGCTTCTCAGGATGCCAATAATCTCCCTTTATCTCAGAAACAATCTCAAGATGAAAGTGTCCAAGGCCATACTGTACAAGCTCCCCACCAAAATTCTCAAACAAATAGAATTCCTAATTCTGAAAAAGATCCTGTCTTAAACCATGAGGCAGTCAACACACACAATCCTAACCATGAATCTCAGTATGCAAAGCTGCAGCAGATGAGTAATCAACAGGCCACTGTAAATGAGCAGCCTGGAAGTCAGGTTAATAGGAATAAACAGGTACCATTTGCCATGTTGCTCCCTATGTTGACTCCCCAGCTTCCCAAAGACAGAGCCATGCAACTTCAAACTTTATTTAATAAATTGAAGAAAGATGAAATACCCAAAGATCAGTTTGTGCGGCTTATGAAAAGTATTGTAGGGGATCAGATGCTTAGGTTAGCATTAACAAAAGTGCAATTACAGACAACAAGATCCAACCCAGGATCCTCTGGGCAGCATCCTCCACCTGTAAGGATGCCAAACATTAATTCAGGTGCAACAAAATTTAATGATCCCCATGCATTAGCACAGCTGCATCAGAGAAGTATGAATGCTGCTGCAGATCAATCTAATAATACTTCTTCAGCTGTCCAAGTGAAAAATGAACCAACCTATCCAGCCATGGACATTAATTCTAAAAAAGCTCGGGAACTGGATGTTCAAGTAGAATCTCAAGGAGTGCAACTAAATCCGTTACCATCATCCAGTTCTAATGCTGTTGGTCAAGAAATGGAAAGATCCTCACTTCACATACAAGGCCTTAATAAGGAGCAACAACAGCATCCACATTTCCCTTCAGCATATGGTAGCAGTGGTGGTAATTATAACCCTTTTTCAGGCTCAACCAGTAGTTCCACATCATCTCTCAGACCACAACCTCAAGATTCACATATGAGGCAAATTCCACATCAGAGCATCAGTCCAAATCAATTAGGTGGGACAACACAGGGTTTGATTGGTTTGACAAAACTTGATCAGCAAAATTCTTTCAATGATCTCAAGAGAATGCCTAGTGGATTTGTGTCCCCTGTCGTAAACAATACAGCATCACAACAAGTTTCAAATTCTTGGCAACCATCAGCAAATAAAGAACAAAATTCTGGCCTGTTTTCATCTGTTTCATATGTCAAAAAGGAGCCTAATGACCTATCTACTGAGCAGCAACACAGGCATAATTTGTCTAAATTGCCTGGGCTGCATTCTGTTAATTCTGTGCAAAATGAACAGAGTAGCAGTGCCAATCAAGGCATAAAGGAGGACTTTTCAAGAGGCCTTCCAGCATCCACAAGTATGCTGCATACAACATCTTCTAGCTTGTTGCCTCTCAATTCTGCTTCCCCTTCTGTATCTCAACGTGACCCTAGTGCCACTTTAATCTCTCAGATCCCATCAAACACAGCTGTTATAAATGCAAGAACACCTCTGAAAAAGCCTTCTCCTGGCCAGAAGAAACCAATTGAAGCACTTGGTTCTTCACCTCCTCCTCCAAGTAAGAAACAAAAAGTGTCTGGGGCATCTCTGGAACCAAGTATTGAACAACTTAATGATGTTACTGCTGTTAGTGGTGTTGATCTTAGGGAGGAGGAAGAAAAATTATTTTCTGGGCCCAAGGAAGACAGTCGAGCTTCAGAAGCATCTCGCAGAGTTGTGAAAGAAGAGGAGGAAAGTCTGATTTTGCAGAAAGCTCCGTTGCAAAGAAAATTGATTGAGATTATGACTGAGTGTGGCTTGAAGGGTATGAGTAATGATTTGGGGAGATGCTTGTCACTGTGTGTGGAGGAAAGAATGCGTGGAGTAATAAGTAATGTGATCAGAATGTCGAAACAGCGGGTTGATTTGGAGAAGACACAACATCGGACTGTTGTCACTTCAGATGTTCGGCAGCAAATCTTAACAATGAATAGGAAGGCAAGGGAAGAATGGGAGAAAAAACAGGCAGAAACAGATAAGCTCCGGAAACTAAATGATGTAGATGGTAATGCTGGGAGTGATGGCGACAAGGAGAAGGATGAGGGTCGCAATAAATCAACAAAGATCGGTAATATTCTGAAGGTGAACAAAGAAGTGGATGACAAGATGAGGACAAATGCTGCTAATGTTGCTGCCCGAGCTGCTGTTGGGGGAGACGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAGACAGAAGAAACGTGAAGGGGGAGTGGATGCTTCATCTGGTTCTCAGCCAGCTAAAGATGGGAGCCACAAATCTTCATCAACATCCGGAAGGAGTACAAAAGATAATCAGGCAAGGGGGAAAAAAGGGGCTGGTAGAAAATTTGGGAGAAGTCATGCCAATACACCCCAAACTAGCGTAGCTCGAAGCATCTCTGTCAAGGACGTGATTGCAGTCCTGGAGAGGGAACCCCAGATGTCCAAATCATCACTTTTATATCGTTTGTATGAGAGAATTCATTCTGACATCTCAACTGAATAA 2811 0.4255 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDLGGDTSTSQLSGSDTGSNNSLSQSLPKWPTSSHDNQTDCQNQEPKDVQQQEQQHSSEMEQKQQQPLVEQLQNVASQDANNLPLSQKQSQDESVQGHTVQAPHQNSQTNRIPNSEKDPVLNHEAVNTHNPNHESQYAKLQQMSNQQATVNEQPGSQVNRNKQVPFAMLLPMLTPQLPKDRAMQLQTLFNKLKKDEIPKDQFVRLMKSIVGDQMLRLALTKVQLQTTRSNPGSSGQHPPPVRMPNINSGATKFNDPHALAQLHQRSMNAAADQSNNTSSAVQVKNEPTYPAMDINSKKARELDVQVESQGVQLNPLPSSSSNAVGQEMERSSLHIQGLNKEQQQHPHFPSAYGSSGGNYNPFSGSTSSSTSSLRPQPQDSHMRQIPHQSISPNQLGGTTQGLIGLTKLDQQNSFNDLKRMPSGFVSPVVNNTASQQVSNSWQPSANKEQNSGLFSSVSYVKKEPNDLSTEQQHRHNLSKLPGLHSVNSVQNEQSSSANQGIKEDFSRGLPASTSMLHTTSSSLLPLNSASPSVSQRDPSATLISQIPSNTAVINARTPLKKPSPGQKKPIEALGSSPPPPSKKQKVSGASLEPSIEQLNDVTAVSGVDLREEEEKLFSGPKEDSRASEASRRVVKEEEESLILQKAPLQRKLIEIMTECGLKGMSNDLGRCLSLCVEERMRGVISNVIRMSKQRVDLEKTQHRTVVTSDVRQQILTMNRKAREEWEKKQAETDKLRKLNDVDGNAGSDGDKEKDEGRNKSTKIGNILKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQARQKKREGGVDASSGSQPAKDGSHKSSSTSGRSTKDNQARGKKGAGRKFGRSHANTPQTSVARSISVKDVIAVLEREPQMSKSSLLYRLYERIHSDISTE 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1573 936 MobiDBLite consensus disorder prediction 33 99 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 753 792 - -
Aed4g1573 936 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 40 363 IPR045144 GO:0005669|GO:0006352
Aed4g1573 936 MobiDBLite consensus disorder prediction 519 533 - -
Aed4g1573 936 PANTHER IP01149P-RELATED 355 930 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 852 871 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 115 161 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 611 626 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 643 662 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 115 147 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 1 99 - -
Aed4g1573 936 ProSiteProfiles RST domain profile. 188 259 IPR022003 -
Aed4g1573 936 PANTHER IP01149P-RELATED 40 363 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 753 794 - -
Aed4g1573 936 CDD TAF4 625 924 IPR007900 GO:0005669|GO:0006352
Aed4g1573 936 Gene3D Histone, subunit A 674 719 IPR009072 GO:0046982
Aed4g1573 936 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 355 930 IPR045144 GO:0005669|GO:0006352
Aed4g1573 936 MobiDBLite consensus disorder prediction 171 190 - -
Aed4g1573 936 Pfam RCD1-SRO-TAF4 (RST) plant domain 191 254 IPR022003 -
Aed4g1573 936 MobiDBLite consensus disorder prediction 297 316 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 297 429 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 519 626 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 338 429 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 834 902 - -
Aed4g1573 936 MobiDBLite consensus disorder prediction 542 587 - -
Aed4g1573 936 Pfam Transcription initiation factor TFIID component TAF4 family 629 925 IPR007900 GO:0005669|GO:0006352
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1573 Aed-Chr4 20561233 20568661 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1573 K03129 - gmx:100797127 1534.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1573 4 20561233 20568661 Aed4g1573 4 20561233 20568661 ECH