Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1571 ATGAAGGAAGCGGAGGAGCAACTATGCGAGGCGGCCAGGAAGGGCGAGACGGAGAAAGTGAGGTCTCTCATAGACTCCGGCGCCGACGTCACCTACTTCGACGGCGATGGCCTCAATTCTCTTATGCACGCCGCAAAGCACGGCCATGCACCCGTCCTCAGCCTCCTCCTCTCCGCCGGCGCTCCCTGGAACGGTCTTTCTCCCTCCGACCTCTCCGCCGGCGACTACGCCATGCAAGAAGGCCACGATGAAGCCATGGAGGTTCTCCTCAACGCCGGGATCCAAGCTGAACTGATCCTGGGAACAATCGCGAGGAAGGAAAACAACAAGGGCGATTCCGGCGGTCACGATTATTTGGAAGACAGAGTGAGTTTTAGCGAAGACAAGCTGATGGACTCTGAAAGCAAAGCCGTGATGATGGCGTGGGAGAAGCCGTTGATGGAGGCTCACGCTAAAGCTGTTTGTTCGGGAGGTGGCCACGTACTCAATGTTGGGTTCGGAATGGGGCTCGTCGATTCGGCCATTCAGCAATACGCTCCTGCGTCGCACACCATCGTTGAGGCTCATCCCGAGGTCTATCAACGCATGCTTCGCGACGGTTGGGCTCAGAAGAAAAATGTTAAGATTGTTTTTGGACGCTGGCAAGATGTTCTCCCTCAGCTTCAAACATATGATGGAATATTCTTCGACACCTATGGGGAGTACTATGAAGATCTGAGGGAGTTCCATCAGCATCTTCCGGCATTGTTGAAACCCGGTGGTATCTACTCATTCTTCAATGGTCTTTGTGGCAGTAATGCGTTTTTCCATGTTGTTTACTGCCATTTGGTATCTCTTGAGCTTGAGAATTTGGGGTATTCCACACAGTTAATTCCATTGCCGGTTAAGGATTGTTTGGGAGAACAAGTTTGGGAAGGTGTCAAACAAAGATATTGGCAGCTCGATACGTACTACCTTCCTGTCTGTCAGTCTCTAGAGGACCCTGAGTGA 990 0.5212 MKEAEEQLCEAARKGETEKVRSLIDSGADVTYFDGDGLNSLMHAAKHGHAPVLSLLLSAGAPWNGLSPSDLSAGDYAMQEGHDEAMEVLLNAGIQAELILGTIARKENNKGDSGGHDYLEDRVSFSEDKLMDSESKAVMMAWEKPLMEAHAKAVCSGGGHVLNVGFGMGLVDSAIQQYAPASHTIVEAHPEVYQRMLRDGWAQKKNVKIVFGRWQDVLPQLQTYDGIFFDTYGEYYEDLREFHQHLPALLKPGGIYSFFNGLCGSNAFFHVVYCHLVSLELENLGYSTQLIPLPVKDCLGEQVWEGVKQRYWQLDTYYLPVCQSLEDPE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1571 329 ProSiteProfiles Ankyrin repeat profile. 3 35 IPR002110 GO:0005515
Aed4g1571 329 Pfam Ankyrin repeats (3 copies) 8 95 IPR002110 GO:0005515
Aed4g1571 329 ProSiteProfiles Arginine and arginine-like N-methyltransferase domain profile. 111 329 IPR026480 -
Aed4g1571 329 PANTHER GUANIDINOACETATE N-METHYLTRANSFERASE 1 324 - -
Aed4g1571 329 PIRSF Rmt2 1 116 IPR017408 GO:0016274
Aed4g1571 329 PIRSF Rmt2 105 326 IPR017408 GO:0016274
Aed4g1571 329 SMART ANK_2a 3 32 IPR002110 GO:0005515
Aed4g1571 329 SMART ANK_2a 36 65 IPR002110 GO:0005515
Aed4g1571 329 SMART ANK_2a 69 98 IPR002110 GO:0005515
Aed4g1571 329 ProSiteProfiles Ankyrin repeat profile. 36 68 IPR002110 GO:0005515
Aed4g1571 329 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 322 IPR029063 -
Aed4g1571 329 SUPERFAMILY Ankyrin repeat 8 96 IPR036770 -
Aed4g1571 329 ProSiteProfiles Ankyrin repeat region circular profile. 36 61 - -
Aed4g1571 329 CDD AdoMet_MTases 161 256 - -
Aed4g1571 329 Gene3D - 1 108 IPR036770 -
Aed4g1571 329 Gene3D Vaccinia Virus protein VP39 109 324 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1571 K18477 - gmx:100527621 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1571 4 20553459 20558064 Aed4g1571 4 20553459 20558064 ECH