Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1566 ATGAAGTCCGAAATGGAGAAAAAAAGAGTGTCCCCCATTCCCAACACTCCTTGCATCAACCCTTGTTGTTTCTTCTGCAGCATGAGAGAAGCAGATGCATCTCTGAGAAGGGCTGGGATAGCGAGCTGCTTCAAGGAAATGCCCGAGGGAGAGAATGATGAACAACACGTGTTGGTGCTGAGTGGACTATGGCAAATAGCAATGAGCCAACCCAACGACCCAGAGTTCCCATCCCTGGGCATATTCAAGTGCATGGCAAGCCTAATCCACAAAGGCATAAACGACAAACACTGGCTTCTCACAAATCAAAACATATACATACCCTATTACGCTGCTCACATCATTGGCTCCTACACAATGAACAAAGAGGAGTTTGCACAACTAGCCGTACAATCAGGTGTCATACCCCCATTACTGGAGCTTCTTAGGGGCAAGATCAGTTGGGTTGAGCAAAGAGTTGCTGTTAGAGCACTCGGTCACTTGGCCAGTTACAAAACCACTTTCGAATCAGTAGCAGCACTACACGAACAAGAGGTTGTGAAACTGGCCATGAACTTGGCTTCAACTTCTTTACAACTGGTCTACGTTGACTTCGTAGCTTTGAAGGAAAACAAAAGACTCGAGCACCATAGAAACTTGCTTACCAGAGGGGTTGGGGATTTGGAGATGGAGAATCGCAAGGCGGAGGAATGGGCTAGCCAGCTTCAGTGTTGGTCTCTTTACCTTCTCAACTGCTTTGCTTGCAAAGATAGGTCTCTGGATCTCATCTGCAAAAAGGTGTTTCTCAAGGACTTGTGCGATATGTGGGGTGGGTTGATCAATCACACGTCACCAGCAGGGGTTGGACTTATTAGAATCTTGTGTTATAGCAAACTAGGAAGGAAAAACATTGTTGAATTACCAAAAGTCCTGAACACTCTAGGTAACCTTTCAAGATCTTCAGATGATTGGCAGTATATAGGTATCGATTGTCTTCTTCTCCTTCTCAAGGACCCTGATACGAGGTACAAAGTTATTGATATTGCCACTTTATACCTTGTTGATTTGATTGAACTTGGAAGCCTTGGAGATAAATCCAACGTGGGTGAGACCATATCAAAGGTTCTCTTTAATTTGGAACCCAACAGACAAAAGGTGGATAGGAGGAACAAGGAGAAGCTACTCTCGGAGGAGAAATTAGAGGAAACAAGGATTTTGGTGAGTTTGATGAAGCAACAAGCGAACCACATGTTCAGGTTGGGAAAGGTGGAAGAAGCTTTAGTGAAATATTCTGAAGCACTTGGTGTTTGTCCCTTGAGGTTTAGAAAAGAGAGGATGGTGATTTATAGTAACAAAGCGCAGTGTAATATTTTGCTTAAGAACGCAGATTGTGCAATCAGTGACTCGACGCGTGCTCTATGCTTATCCAACCCAACAAACACGCATAGGAAAAGCCTTTGGAGGAGGTCACAAGCGTATGACATGAAAGGAATGGCAAAAGAGAGCCTCATGGACTGCATAGTGTTCATCAACAACAGTTGCATCAAGTCGAAGGCGGGTGAGAGTAGTAGTGAGGCCATGCGTGTCAAGAATATTCCTTACCACGCAGCGCGCATGATCTCCAAACACATGGAGGCCACGTGGCTCTTTGCCACTGCTCGCTCAAAGCTGGGAAAAACAACAACAACAACGACGCAGGAATTCAACCAAGTTGGAGAGGATGGGGATGAAGACCAACAACCACGTGATCATCATAAGGCGAAGATGATGATGATGGTGGAAAACAGAAACAATCTCTTACACGGTCTGTCAACCATTATTGAAGAACCTTTTCACGCAAAAGAAGGTGCAGGTAGGAGAAAGATGGAAAGGGCGAGAAGGAGATTCAACAAAGGTGTTGCGGCTCGATCAACGTATAAGTCAAATTAA 1908 0.4486 MKSEMEKKRVSPIPNTPCINPCCFFCSMREADASLRRAGIASCFKEMPEGENDEQHVLVLSGLWQIAMSQPNDPEFPSLGIFKCMASLIHKGINDKHWLLTNQNIYIPYYAAHIIGSYTMNKEEFAQLAVQSGVIPPLLELLRGKISWVEQRVAVRALGHLASYKTTFESVAALHEQEVVKLAMNLASTSLQLVYVDFVALKENKRLEHHRNLLTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKDRSLDLICKKVFLKDLCDMWGGLINHTSPAGVGLIRILCYSKLGRKNIVELPKVLNTLGNLSRSSDDWQYIGIDCLLLLLKDPDTRYKVIDIATLYLVDLIELGSLGDKSNVGETISKVLFNLEPNRQKVDRRNKEKLLSEEKLEETRILVSLMKQQANHMFRLGKVEEALVKYSEALGVCPLRFRKERMVIYSNKAQCNILLKNADCAISDSTRALCLSNPTNTHRKSLWRRSQAYDMKGMAKESLMDCIVFINNSCIKSKAGESSSEAMRVKNIPYHAARMISKHMEATWLFATARSKLGKTTTTTTQEFNQVGEDGDEDQQPRDHHKAKMMMMVENRNNLLHGLSTIIEEPFHAKEGAGRRKMERARRRFNKGVAARSTYKSN 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1566 635 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 13 620 - -
Aed4g1566 635 MobiDBLite consensus disorder prediction 555 577 - -
Aed4g1566 635 SMART arm_5 122 163 IPR000225 GO:0005515
Aed4g1566 635 SUPERFAMILY TPR-like 401 499 IPR011990 GO:0005515
Aed4g1566 635 Gene3D Tetratricopeptide repeat domain 399 525 IPR011990 GO:0005515
Aed4g1566 635 Gene3D - 27 389 IPR011989 -
Aed4g1566 635 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 13 620 - -
Aed4g1566 635 SUPERFAMILY ARM repeat 99 378 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1566 Aed-Chr4 20537983 20540158 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1566 - - gmx:100777591 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1566 4 20537983 20540158 Aed4g1566 4 20537983 20540158 ECH