Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1548 ATGAAGCGTCCACTACTAGCATCATCGAGCGGCGACGAGGAGAGGAAGATGAAGAAGAAGGCGAAGGCGGTGGTGGTGGAAAACGACGAGGAGGCGGAGGGGCTTGGGCGTTTCGACGACAATCTGCTGTTCGAGGTGTTGAAGCACGTGGACGCGCGGTCGCTGGCTATGGCGGGATGCGTGAACAAGCAGTGGCACAAAACGGCGCAGGACGAGAGGCTCTGGGAACTCATCTGCACCAAGCAGTGGGCTAACACTGGCTGCGGGGAGCAACAGCTACGATCCGTGGTCCTCGCCCTCGGTGGCTTCCGTCGCCTCCACGCTCTCTATCTCCTCCCACTCTCCAAGCCTCAACAAACATCATCTTCATCCTCGGCCTGGGGTCCCACAATACCGCAGGTGTCTCGATCCAAGCCGCTACGTTTGGGGAAAGACGAGGTTCACCTCTCTCTTTCGCTCCTCTCCATTCGCTACTACGAGAAGATGAATTTCAATAACAGAACCACCAGATCATGA 516 0.5717 MKRPLLASSSGDEERKMKKKAKAVVVENDEEAEGLGRFDDNLLFEVLKHVDARSLAMAGCVNKQWHKTAQDERLWELICTKQWANTGCGEQQLRSVVLALGGFRRLHALYLLPLSKPQQTSSSSSAWGPTIPQVSRSKPLRLGKDEVHLSLSLLSIRYYEKMNFNNRTTRS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1548 171 PANTHER F-BOX PROTEIN GID2-LIKE 9 164 - -
Aed4g1548 171 PANTHER F-BOX ONLY PROTEIN 48-RELATED 9 164 IPR045118 GO:0019005|GO:0031146
Aed4g1548 171 Pfam F-box domain 40 76 IPR001810 GO:0005515
Aed4g1548 171 SUPERFAMILY F-box domain 34 84 IPR036047 GO:0005515
Aed4g1548 171 Gene3D - 22 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1548 Aed-Chr4 20434419 20434934 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1548 K14495 - gmx:100801734 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1548 4 20434419 20434934 Aed4g1548 4 20434419 20434934 ECH