Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1547 ATGAATCTGGAAGGGAAAGTAGTAATGGAAATGGGGATTTCCAAGACAAGCACCGACAACTCCAATTCCAATTCCAAAAGCAATAGCAATAGTAGCAGCAGCACTAAGACTGAAACTCACAACCATATCTCCGATGCTCCTGCTCCCTACGCCGAAGGAGAAAAGGTCTTAGCCAACCACTCTGATTGTCTTTACGAAGCCAAGGTGAGGCACGTTGAGTACAACGACACTAAAGGCTGGCACTTCTTCGTTCATTATCTTGGTTGGAAGAAAAGCTGGGATGAATGGGTTGACATGGATCGTTTGATGAAACACACCGAGGAAAATATGCGCAAAAAACGTGACCTTGACGAGAAGCTTGGCAATGATAAGAATGCTAAAGTCCCCCGCGGTTCTCTGCCTAAATCCAAGACTACTAACGGCGGTCAGATAATTATTTTCTTATTTCAATCCGATTGTCTTGTCCACACAATTCAGGGAAAACCTGAGGTTGATCCTGACAAGCCTTTCAACATTCAAATTCCTCCAACACTAAAGAAACAATTAGTTGATGATTGTGAGTTTATTACCCATCTTGGCAAGCTTGTTAAACTTCCTCGTACTCCGAATGTGAAAGGCATATTGAAAAAATATTTTGATTACAGATTGAAGAAATTTGGCTCGATGGCTGATTCAGTTGAAGAAGTTATGAAAGGATTGAGTTGTTACTTTGACAAAGCACTGCCAGTGATGCTTTTGTACAAGAATGAGCGCCAACAGTACCAAGAGGCTTGTCCAGCCAATGTGTTTCCTTCTGCTATATATGGTGCTGAGCATTTGTTACGTCTCTTTGGTATGCTCGTTTGTCTGCCACAAGACGAGCTTATTATATGA 873 0.4192 MNLEGKVVMEMGISKTSTDNSNSNSKSNSNSSSSTKTETHNHISDAPAPYAEGEKVLANHSDCLYEAKVRHVEYNDTKGWHFFVHYLGWKKSWDEWVDMDRLMKHTEENMRKKRDLDEKLGNDKNAKVPRGSLPKSKTTNGGQIIIFLFQSDCLVHTIQGKPEVDPDKPFNIQIPPTLKKQLVDDCEFITHLGKLVKLPRTPNVKGILKKYFDYRLKKFGSMADSVEEVMKGLSCYFDKALPVMLLYKNERQQYQEACPANVFPSAIYGAEHLLRLFGMLVCLPQDELII 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1547 290 Gene3D MRG domain 168 286 IPR038217 -
Aed4g1547 290 PANTHER CHROMATIN-BINDING PROTEIN 10 280 - -
Aed4g1547 290 Gene3D - 17 132 - -
Aed4g1547 290 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 10 280 IPR008676 GO:0005634|GO:0006325|GO:0006355
Aed4g1547 290 SUPERFAMILY Chromo domain-like 44 190 IPR016197 -
Aed4g1547 290 CDD CBD_MSL3_like 54 111 - -
Aed4g1547 290 Pfam RNA binding activity-knot of a chromodomain 52 102 IPR025995 -
Aed4g1547 290 ProSiteProfiles MRG domain profile. 166 290 IPR026541 -
Aed4g1547 290 Pfam MRG 166 280 IPR026541 -
Aed4g1547 290 MobiDBLite consensus disorder prediction 15 42 - -
Aed4g1547 290 MobiDBLite consensus disorder prediction 114 137 - -
Aed4g1547 290 MobiDBLite consensus disorder prediction 15 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1547 Aed-Chr4 20427801 20431679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1547 K11339 - gmx:100777259 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1547 4 20427801 20431679 Aed4g1547 4 20427801 20431679 ECH