Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1445 ATGTCACTGCCCACCATGACCATTATGAGAATTAATCCCAGCTTGATCATCCTCCTCCTCTTCACCACAACAAAGGCACAATCCCCAGTTTACATGTACAATTTTTGCGACAACTCAACTCTTCTTAGCCCCTCATACAAAACCAACGTTAACAAAGTTCTCTCATGGGTTTCCTCAGACTCAGCCACGGGCCAAGGTTATAACCACACCATCGTAAACAACAACGACAATGATAGTAATGATACTGTTTATGGGTTATACGAGTGCCGGATCGACATAACGGGATATTTCTGCCAGTTCTGTCTCACCAATGCCGCCAGCGAAATTGCCCGGCGGTGTCCCAACAGTGTTAGCTCTATCATTTGGTATGATCTATGCGTCCTCCGCTACTCTGACCATAGTTTATATGGCAAAGTGAGTATAAGCCCCACATGGAATATTACCGGGAGCAGAATCATCAAGGACTCAACAGAAGTTGAGAAAGCAGAGGATTCTATGGAGAGTTTGATTAGAAAAGCGGCAATAGAGACGAAGCAGTTCTGGGCAGTGGAGGAGTTCAATTGGGTTAACAATGAGAAGAGGTATGGGTGGGTGCAGTGTGAGAAGAGTCTCACAACTGATGAGTGCGGGCAGTGTTTGCAAGGTATGTTAGATACGTTTCCACAGTGCTGTGAGAGTGGAACAAAGCTCTACTATGTTTCAGCATCTACTGCTTCTGCTATAGGAATAGGGTTAGAAAAGTGGATACATGTCTCCAGAGTATGTTATGCAAGGATTGTTTTCGGTGAAATCGGATGTCTTCAGCTTTGGAGTTCTTGTTTTGGAAATCATTAG 834 0.4436 MSLPTMTIMRINPSLIILLLFTTTKAQSPVYMYNFCDNSTLLSPSYKTNVNKVLSWVSSDSATGQGYNHTIVNNNDNDSNDTVYGLYECRIDITGYFCQFCLTNAASEIARRCPNSVSSIIWYDLCVLRYSDHSLYGKVSISPTWNITGSRIIKDSTEVEKAEDSMESLIRKAAIETKQFWAVEEFNWVNNEKRYGWVQCEKSLTTDECGQCLQGMLDTFPQCCESGTKLYYVSASTASAIGIGLEKWIHVSRVCYARIVFGEIGCLQLWSSCFGNH 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1445 277 Gene3D - 145 238 IPR038408 -
Aed4g1445 277 Gene3D - 28 134 IPR038408 -
Aed4g1445 277 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 18 236 - -
Aed4g1445 277 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Aed4g1445 277 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Aed4g1445 277 Coils Coil 159 179 - -
Aed4g1445 277 Pfam Salt stress response/antifungal 43 132 IPR002902 -
Aed4g1445 277 Pfam Salt stress response/antifungal 162 227 IPR002902 -
Aed4g1445 277 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1445 Aed-Chr4 18985181 18988725 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1445 16 225 Receptor kinase-like Gene Family AT4G05200 33.796 7.95e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1445 - - pvu:PHAVU_011G194700g 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0085 1 1887134 1894818 Aed4g1445 4 18985181 18988725 PCT