LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1150	ATGGATGCATCATCGAGTGGAGAAGGATCGGAGCGTGGCGAAGAGAAGCCAGGGATGTTTCAATACTTTGGTTGGGTTTATCACATCGGTCACAATTCCGTTGGCCGCGAGTATTGCCACCTCCGATTCCTCTTGGTCAGGGGCAAGTTTGTTACCATGTACAAGCGTGACCCTCACGAGAATCCCGGCATCAAACCCATTAGACAGGGAGTCATAGGTGCCACACTAGTCGTGGAGGAGCTAGGATGTCGAAAGGTCAACAATGGGGATCTTTATGTAATACAAATCTATAGTCGATTAGATGAGAGCCGAAAAGGAGAAATTGCTTGTGCCACAGCTGAAGAAGCTGAGCATGAGTTATCAATGGAAAGTAGTGCCAGAGAGAAACTAATCCAAGAAATGGAGATCAATTTACAAGGCAATCGACATAAAATGAGACGGTATGCCTCTGGGTTGAAGAAGCTTAAAAGAATTGGCCAAGGCCCAGAGACACTCTTACGATTATCATCAAAGTTTTTTAGTGGTTCTGATGGGTTTGAAGTGGAGAATGGAGATGCATTTGATGCATATCAATGGAAATGTGTTCGTACCATGTCTGGCATTAGAATCTTTGAGGATGTTTCCAATCACAAGCCTGGTAAGGGTGTCCTTGTGAAGTCCGTTGGGGTTATTGATGCAACTGCAGATAAGTCTTACGATGGACATTACGATGTTGTTTATGGAACCTACGATCCTAAGTATTTAACTCGGTGGCATTCAAAGCGAGATTTTATCTTCTCTAGGCAATGGTTTCGGGCACAAGATGGAAAATATACTATCTTGCAATTTCCATCTATACATAAGAAAAAGCCACCAAGATCAGGATTTCGACCATCTACATGGGAAATCAGAAATCTGAACACACCTATGGGATCAGAAAGACCAAGATGTTTAGTGACTCACACTTTAGAGATACACTCTGCATCATGGTATCGATGGAAGAACAGCCACCAGTGCACAAAATTTGAGAAGAGCATCCCTTATGCATTGTTGTGCCAAGAATATATTGGAGCCAATCCAGAACCTCTCCATGCCACTACCGTTCATTCCCATATCTCCACTCCTTCTATGTCCAGGTCTGAATTTGTAGATGTAGAAGTGCAAGAGGAGTTTTATGATGCAATTGCTGCTGAGTCAATTTCATCAGATGAAGAAAGTGAAGATGATAGGGAACTAGATCAGGAAAATAAAGTCAAACTAAAGAATGTTTCTTGGGCCATGACAAACCTAGCTTTGAAGCGACTTGCAGCAGCAGGTCCTGATTCAAGTTCTATCACAATCGATCTGAGTGAGTTGCATGGCTCTTTGCGCAGAGGTGAGGAACAGAAGGACACAGACTGTTGGACTTCTCCTGTTGGAGGAGATCCTCTTCTCAAGCTCATAGCAGTTGATTGGTTAAAAGTTGACAAAGCTGCAGACAGAATTGCATTGCACCATAGAAGTTTGGTTCAGTCAGAAGCTGGGAAAAATCTTCCATTTGTCCTTGTATTCAATCTACAGGTTCCAGCTAAACCAAACTACAGCTTGGTTCTGTATTATGCATCTGACAGACCTATAAATAAAGATTCTCTATTGGCTAAGTTTTTGGATGGAGATGACACATTTAGGGACTCAAGATTCAAATTAATTCCCAGCATAGTTGAGATAGATGTAGATATTGGATCATCCTCTGTTGCTAGGAGTGTCATTGGCCTTGTTCTGGGATATGTCACAAGCCTAGTTGTTGACCTCGCAATTTTGATAGAGTGTTCAATCACTTAA	1800	0.4233	MDASSSGEGSERGEEKPGMFQYFGWVYHIGHNSVGREYCHLRFLLVRGKFVTMYKRDPHENPGIKPIRQGVIGATLVVEELGCRKVNNGDLYVIQIYSRLDESRKGEIACATAEEAEHELSMESSAREKLIQEMEINLQGNRHKMRRYASGLKKLKRIGQGPETLLRLSSKFFSGSDGFEVENGDAFDAYQWKCVRTMSGIRIFEDVSNHKPGKGVLVKSVGVIDATADKSYDGHYDVVYGTYDPKYLTRWHSKRDFIFSRQWFRAQDGKYTILQFPSIHKKKPPRSGFRPSTWEIRNLNTPMGSERPRCLVTHTLEIHSASWYRWKNSHQCTKFEKSIPYALLCQEYIGANPEPLHATTVHSHISTPSMSRSEFVDVEVQEEFYDAIAAESISSDEESEDDRELDQENKVKLKNVSWAMTNLALKRLAAAGPDSSSITIDLSELHGSLRRGEEQKDTDCWTSPVGGDPLLKLIAVDWLKVDKAADRIALHHRSLVQSEAGKNLPFVLVFNLQVPAKPNYSLVLYYASDRPINKDSLLAKFLDGDDTFRDSRFKLIPSIVEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIECSIT	599

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1150	599	Gene3D	-	186	338	IPR023393	-
	Aed4g1150	599	PANTHER	PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN	231	561	-	-
	Aed4g1150	599	Pfam	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal	464	561	IPR009769	-
	Aed4g1150	599	Pfam	Protein ENHANCED DISEASE RESISTANCE 2, C-terminal	559	596	IPR009769	-
	Aed4g1150	599	PANTHER	ENHANCED DISEASE RESISTANCE-RELATED	560	596	IPR045096	-
	Aed4g1150	599	PANTHER	ENHANCED DISEASE RESISTANCE-RELATED	231	561	IPR045096	-
	Aed4g1150	599	SUPERFAMILY	Bet v1-like	182	318	-	-
	Aed4g1150	599	PANTHER	PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN	560	596	-	-
	Aed4g1150	599	PANTHER	PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN	10	229	-	-
	Aed4g1150	599	CDD	START	191	344	-	-
	Aed4g1150	599	PANTHER	ENHANCED DISEASE RESISTANCE-RELATED	10	229	IPR045096	-
	Aed4g1150	599	Coils	Coil	113	133	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1150	Aed-Chr4	10991192	11014189	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g1150	-		-	gmx:100786048	910.983