Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1146 ATGGCAGGTGGGTCTTTTGCAACAGGTGTTGTGAACAAGGAGAGGGCTGAGGAGTATAAAGGGAGAGTCACTGCTTATGTCATCATCTCTTGCATTGTTGCTGCCATAGGAGGGTCTCTCTTTGGCTATGATGTTGGGATTTCAGGTGGGGTTACATCCATGGATGACTTTCTTGAAGAGTTCTTCCCCTCAGTATATAGACAAAAACAGCAGGCACATGAAAACAACTACTGCAAGTACGACAACCAGGTCCTTGCAGCATTTACCTCTTCTCTGTACATTGCTGGTTTAGTTGCATCCCTGATAGCATCTCCCGTGACAAGAAAGTATGGACGTCGAGCGAGTATCATAGGCGGTGGTATCAGCTTCCTTATTGGATCAGTTCTGAATGCTTCAGCTGTTAATCTGGCAATGTTGATCTTAGGCCGTGTCATGCTTGGTATTGGCATTGGATTTGGAAATCAGGCTATTCCGCTTTATTTGTCAGAGATGGCGCCAACACACCTTCGAGGAGGCCTTAACATGCTGTTTCAAGTTGCAACAACTTTTGGAATTTTCACAGCAAACATGATCAATTTTGGAACACAAAAGATCAGGCCTTGGGGTTGGAGGCTGTCCCTAGGCTTGGCTGCAGTGCCGGCTCTTCTGATGACTGTGGGAGGGATATTTCTTCCGGACACTCCGAATAGCTTAATCGAACGAGGAATGCTGGAGAAAGGAAGGAAGCTGCTAGAAAGAATCAGAGGAACCAATGAGGTTGATGCAGAGTTCCAAGACATGATTGATGCAAGCATGTTGGCCAAGGCGATAAAGCACCCGTTTCGTAACATCCTTAAGAGAAGGTACAGGCCGGAGTTGGTGATGGCGATCTTCATGCCTACCTTTCAGATCCTGACTGGCATAAACTCAATTCTCTTCTATGCTCCAGTGCTGTTTCAAAGCATGGGATTTGGAGGGGATGCTTCTCTCATCTCTTCGGCTTTGACTGGTGGAGTTCTTGCTGGTTCTACATTCATTTCCATAGCAACGGTTGATAGGTTGGGAAGGAGAGTTCTTCTTCTTAGTGGCGGAATACAAATGATCACATGCCAGGTCATAGTGGCCATTATTCTAGGGGTCAAGTTTGGAACAGACCAAGAACTGTCAAAAGGGCTTTCAATCCTGGTGGTAGTGGTGATCTGCCTATTTGTTCTTGCATTTGGATGGTCATGGGGCCCACTTGGCTGGACAGTCCCCAGTGAGATATTTCCATTGGAAATCAGGTCAGCAGGGCAAGGCATCACAGTTGCTGTAAACCTTTTCTTCACTTTCGTAATTGCACAGGCCTTCCTTGCTCTTCTATGCTCATTCAAGTTTGGGATCTTTCTCTTCTTTGCTTCCTGGATCACCCTCATGACCATTTTTGTTTACTTCTTCCTACCTGAAACCAAAGGGATTCCCATTGAGGAGATGTCGTTTATGTGGAGGAAGCACTGGTTCTGGAAAAGGGTGTGCATCCCAATTGATAGCACTGGTAGTATCAGAATTAATTGA 1533 0.4592 MAGGSFATGVVNKERAEEYKGRVTAYVIISCIVAAIGGSLFGYDVGISGGVTSMDDFLEEFFPSVYRQKQQAHENNYCKYDNQVLAAFTSSLYIAGLVASLIASPVTRKYGRRASIIGGGISFLIGSVLNASAVNLAMLILGRVMLGIGIGFGNQAIPLYLSEMAPTHLRGGLNMLFQVATTFGIFTANMINFGTQKIRPWGWRLSLGLAAVPALLMTVGGIFLPDTPNSLIERGMLEKGRKLLERIRGTNEVDAEFQDMIDASMLAKAIKHPFRNILKRRYRPELVMAIFMPTFQILTGINSILFYAPVLFQSMGFGGDASLISSALTGGVLAGSTFISIATVDRLGRRVLLLSGGIQMITCQVIVAIILGVKFGTDQELSKGLSILVVVVICLFVLAFGWSWGPLGWTVPSEIFPLEIRSAGQGITVAVNLFFTFVIAQAFLALLCSFKFGIFLFFASWITLMTIFVYFFLPETKGIPIEEMSFMWRKHWFWKRVCIPIDSTGSIRIN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1146 510 CDD MFS_STP 33 475 IPR044778 GO:0015145|GO:0015749
Aed4g1146 510 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Aed4g1146 510 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 1 498 IPR045262 GO:0015144
Aed4g1146 510 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed4g1146 510 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1146 510 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1146 510 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1146 510 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1146 510 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1146 510 PANTHER - 1 498 - -
Aed4g1146 510 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed4g1146 510 Gene3D MFS general substrate transporter like domains 19 491 IPR036259 -
Aed4g1146 510 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1146 510 Pfam Sugar (and other) transporter 31 488 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g1146 510 SUPERFAMILY MFS general substrate transporter 21 484 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1146 Aed-Chr4 10940246 10945754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1146 1 497 Organic Solute Cotransporters AT4G02050 77.867 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1146 K24193 - gmx:100820434 902.894