Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1112 ATGGCGAAATTGAAGATAGGAGGAACATGGGCGGGGGTCCTGGAGGAGGTGGACCTTCACGCCTGGACTCTCGCCACTCTCCGCGACCACGTCGCCGCCCGATCGAGCTCTCCCGCCGACTCCATCAACCTCATCTGCGCCGGCAAGATTCTCCGAGACGACGCCGTTCCGCCGCAAACCCTCTCCCAACTCGGCGTCAGAAACAACGCCAAGATTCTCGCCACGCGCGCCGCCTCGCCACTCCAGGGACACTCCTTCCTAGCCCAGGAGGAACGCTCCTCCAGACTCGCGCGCATCAGGGCGGCTGTGAATACGATGGCAGATAGGCACGCCGATGGTGCATTGCCAGTCGAGGACTTCAATATCGAAGTCGAGGATCAGAATGGACAGAAAGTGCGGCTAGGCTCTGAGACTGACCAGAGGGCAGTGATGATGGGACTGATGCTTCATGCGAAGGGGAAGCGACTTATCAGACAGGGGAACTACAAAGATGCGCTGGAAGTGCTTAGCATGGGAGAGGAGTCATTCTCTCTCTGTGATGCAAAGGTCATTGAGCTTATCGACAATGTTCCAATACTACAAATAGACATGGTATGGTGCTATTTTATGTTACGAGATATCAGTTGGCTCTCGGTTGCAGGAAAGCGTCTTGAAATGGCTAGGGCAGGTATTGAACGTGCTCATGGAAAGGATTCTTTTCGCGTCAGGCTCCTACAAGGTGGTCGCTATCCAGAACTTGCTTTGCATTTGAGACTAGAGCTACTTGAAGGGGTGGTGGCATATCATAGTGGCCAATTGGACAAATCCAAAAAAGCATTAGCGTCAGCAAAAGCCAAGTTTGTCCAGCTACAAGTACCAGATGAAGCCTTATCTCTTGTTATGAGCATGGGCTTTGTTGAACGTGATGCAAAGCAAGCATTGCGAATGAATAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGCTGAGGAGAAGGAAAAGAAATTGAAAAAGAGGGAGGAGGATATTCGGAGAAGAAATGAAATTAAGGAACAAAAGCTGTATGGGATGACACCCTTGAAGAAAGCTGTGGATCTAGAGAGATTGAAGGAATTGGTCTCTATTGGGTTTGAGAAGGAGCTTGCAGCTGAAGCCCTTAGAAGAAATGAAAATGACACTCAGAAAGCATTGGATGATTTAACAAATCCAGAAACTAACTCTGCTCTACAGGTTAATATCGAGTCGAGGAAAAGGAAGAGACAGAAACAAGCACGTGATTCTGAAATTGAAAAAATTGTGCAAATGGGTTTTGAAAGATCAAGAGTGGTTGCTGCTTTTGACACTGGAGGTAGTTTAGAAGAAGTGTTGCTAAGACTGACAGCACTACCTGGGACTGACCCCATGCAACCTCAAGAGAATCTGGCTGCCGCTCCCCATGGTGGTGCGAGTTCGTCTGCTCCTTTACTGGACAATGTTAGTTCCGATACAGCGATGAATGGGATTGAAGATCACAGCATAACAGAACAGCGAGACATAGAGATGGAAAACGAGCTCTCTGCAGATATAGAGAAAGCCGATGCCTTGGCCGATTATGACATCGAAGTCAACGTAGAAGGGGAAGCCATAACTGAGTACCTGGCCATGGTTGAGTCTGCAGGCACTTGTCGGGAAACTGTTCCTTCCCAGTAA 1668 0.4898 MAKLKIGGTWAGVLEEVDLHAWTLATLRDHVAARSSSPADSINLICAGKILRDDAVPPQTLSQLGVRNNAKILATRAASPLQGHSFLAQEERSSRLARIRAAVNTMADRHADGALPVEDFNIEVEDQNGQKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLSMGEESFSLCDAKVIELIDNVPILQIDMVWCYFMLRDISWLSVAGKRLEMARAGIERAHGKDSFRVRLLQGGRYPELALHLRLELLEGVVAYHSGQLDKSKKALASAKAKFVQLQVPDEALSLVMSMGFVERDAKQALRMNNQDVGGAIDFLAEEKEKKLKKREEDIRRRNEIKEQKLYGMTPLKKAVDLERLKELVSIGFEKELAAEALRRNENDTQKALDDLTNPETNSALQVNIESRKRKRQKQARDSEIEKIVQMGFERSRVVAAFDTGGSLEEVLLRLTALPGTDPMQPQENLAAAPHGGASSSAPLLDNVSSDTAMNGIEDHSITEQRDIEMENELSADIEKADALADYDIEVNVEGEAITEYLAMVESAGTCRETVPSQ 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1112 555 MobiDBLite consensus disorder prediction 456 478 - -
Aed4g1112 555 Gene3D - 286 325 - -
Aed4g1112 555 Gene3D - 359 396 - -
Aed4g1112 555 SMART uba_6 418 454 IPR015940 -
Aed4g1112 555 SMART uba_6 286 323 IPR015940 -
Aed4g1112 555 SMART uba_6 358 395 IPR015940 -
Aed4g1112 555 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 545 IPR039749 -
Aed4g1112 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Aed4g1112 555 CDD UBA 362 391 - -
Aed4g1112 555 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Aed4g1112 555 SUPERFAMILY UBA-like 354 396 IPR009060 GO:0005515
Aed4g1112 555 ProSiteProfiles Ubiquitin domain profile. 23 72 IPR000626 GO:0005515
Aed4g1112 555 SUPERFAMILY UBA-like 278 325 IPR009060 GO:0005515
Aed4g1112 555 Coils Coil 322 346 - -
Aed4g1112 555 SUPERFAMILY Ubiquitin-like 22 76 IPR029071 -
Aed4g1112 555 Gene3D - 15 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1112 Aed-Chr4 10458310 10463519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1112 - - gmx:100804062 935.25