Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1108 ATGGATCTTGATGGAGGGAGTTCATCAACAGTTAGCACAGGAGCACAGGCAATTCCAGGATGGTCAACACGACATGGTGCTTTCTATCAGTTTACACAGCAGAACCTTCCAGCATGTAAACCTGTTCTTACACCTGCAGCAGTTATTGCTACATTTCTATTGATGGGTTTCATTTTCATTCCTGTTGGACTTATTACACTTCGTGCTTCAAATAGTGTCGTTGAAATTGTGGATAGGTATGACATTGATTGTGTACCTGAAGAATTTAGAAGTAACAGGGTCGCATATATTAAAGATGATTCAATCTCCAAAAACTGTTCACGATTCTTAAAGGTACTTAAGCCAATGAAAGCACCAATTTATATCTATTATCAGCTTGATAACTATTACCAGAACCACCGACGGTATGTCAAAAGTAGAAGTGACCCGCAGCTCTTACATGGACTTGGATACAATTCCACCAGTCCTTGTAAACCTTTAGAGTCCTCCCATGATCTTCCAATTGTACCTTGTGGGTTGATAGCATGGAGTTTGTTCAATGATACATATACATTTAACCACGGGCCATCAGAATTGAAGGTCAATAGGAAGAATATTGCATGGAAGAGTGATCGTGATCACAAATTTGGAAAGAATGTTTACCCATTTAATTTTCAGAATGGGACTTTGATTGGGGGTGGAAAGCTGGATCTAAGTATTCCTCTTGGTGATCAAGAAGATCTCATTGTTTGGATGCGAACTGCTGCTCTCCCTACCTTCCGAAAGTTATATGGTAGAATTGAAGAGGATTTGGAGGCAGATGATGTCATAGTAGTCCACCTAGAGAATAACTATAACACTTACAGTTTTGGTGGAAAAAAGAAGCTTGTTCTGTCAACATCAAGCTGGTTGGGTGGAAAAAATGACTTCCTTGGAGTTGCCAATTTATTTGTTGGTGCCTTTTGTATATTGATCTCCATCATCTTCCTGTTGCTTCATATGAAAAATCCTAGACCTTATGGGGACACAGCATACTTATCTTGGAATAGGAAAACCATTGCTAGCTGA 1047 0.3945 MDLDGGSSSTVSTGAQAIPGWSTRHGAFYQFTQQNLPACKPVLTPAAVIATFLLMGFIFIPVGLITLRASNSVVEIVDRYDIDCVPEEFRSNRVAYIKDDSISKNCSRFLKVLKPMKAPIYIYYQLDNYYQNHRRYVKSRSDPQLLHGLGYNSTSPCKPLESSHDLPIVPCGLIAWSLFNDTYTFNHGPSELKVNRKNIAWKSDRDHKFGKNVYPFNFQNGTLIGGGKLDLSIPLGDQEDLIVWMRTAALPTFRKLYGRIEEDLEADDVIVVHLENNYNTYSFGGKKKLVLSTSSWLGGKNDFLGVANLFVGAFCILISIIFLLLHMKNPRPYGDTAYLSWNRKTIAS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1108 348 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 67 331 IPR005045 GO:0016020
Aed4g1108 348 PANTHER CELL CYCLE CONTROL PROTEIN 50 8 346 IPR005045 GO:0016020
Aed4g1108 348 PANTHER ALA-INTERACTING SUBUNIT 2-RELATED 8 346 - -
Aed4g1108 348 PIRSF Lem3/Cdc50 7 344 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1108 Aed-Chr4 10406670 10416191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1108 - - gmx:100789806 664.84