Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1098 ATGCCATCCCTAAAAATGAAGAGCAAAGTAAGCGTGAGCTGTTTAACGGAAACAAAGGATCTTCATGTTTGTTCGAAATCAAAAATAATTTCCAAAAGCCCATGTTCTAAAATCATGATTTCTACTCAAAAGGTTGAAATAGACACTACTGTTCAAAATTGCCTAGATGTTTCCTCAAGGACGCAGCCCAAAGACGTTGCATGTGATCAGTCTATTGAAAACAAAGAATTTTTGGATAAAGAAAACTCTGAATCTTGTTCCTCTGTTGTGGGAAAAATGGTAGAGTTTGGTTTTATTGGCTTTAGACATTCTTTATTCATTGGAATGAGCATTGGTGATACAAACATGGCAGGGGTGGGAGCTGATGAGGGAAGAAGCATATGTGGTTATGAAACATGCGATGTATCAGACTTCTACATTTCTGACATGATCATTACAAGCTTACCCTTTGGGGGAAATTCCTTTGATGATGATATCAGCGAAACCAACTGCCTATCTGATTATGGATCTGCTGAGCCATCCATGTTTACTGCGTCTGAACAGTACATGATCCTGCCTGCTCTTGAAGATGATATTAAAGTTGGCACTACTTCTGATATCATATCATATGAAGAAGCTGTGATGGTTCGAGAAAGTGCTAGTTTGTATTCAGCAATGGCTCAGATAAGATCCTGCAACCAAGAGTTTGATGTTAAAAGTGACTTGGATAAATCAGAGAGCTTTGATCCACAGTCATTTATCAAGAATTTACCAGAACTATCAGAAATAGAAGTAAATGGGCAGCCAACCCTAATTCCAAAGCAATCTCCAAGAAGAAAGTCAGTAACTCTGGTGCTGGACTTAGATGAGACACTTGTTCATTCTACACTGGAACACTGTGATGATGCTGATTTCACTTTTACCGTCTTCTTCAATTTGAAAGAATACACAGTATATGTAAAACAGAGACCTTATCTTCACACATTCTTGGAGAGAGTATCAGAGATGTTCGAAGTAGTAATTTTTACTGCCAGCCAAAGCATATATGCAAAGCAACTACTTGATATATTGGATCCTGATGGAAAATTTATTTCCCGTCGCATGTATCGAGAATCATGCCTTTTTTCAGATGGAAATTACACAAAAGATCTTACTATCGTAGGTGTTGATCTTGCAAAAGTTGCCATAATTGATAATTCACCTCAGGTTTTCCGATTGCAAGTGAATAATGGTATTCCTATAAAGAGTTGGTTTGACGATCCATTAGATTGTGCACTGATGTCATTACTTCCCTTTCTAGAGACCTTGGTTGATGCTGATGATGTCCGTCCTATCATTGCAAAGAGATATGGTAACAAAGAATAA 1344 0.3772 MPSLKMKSKVSVSCLTETKDLHVCSKSKIISKSPCSKIMISTQKVEIDTTVQNCLDVSSRTQPKDVACDQSIENKEFLDKENSESCSSVVGKMVEFGFIGFRHSLFIGMSIGDTNMAGVGADEGRSICGYETCDVSDFYISDMIITSLPFGGNSFDDDISETNCLSDYGSAEPSMFTASEQYMILPALEDDIKVGTTSDIISYEEAVMVRESASLYSAMAQIRSCNQEFDVKSDLDKSESFDPQSFIKNLPELSEIEVNGQPTLIPKQSPRRKSVTLVLDLDETLVHSTLEHCDDADFTFTVFFNLKEYTVYVKQRPYLHTFLERVSEMFEVVIFTASQSIYAKQLLDILDPDGKFISRRMYRESCLFSDGNYTKDLTIVGVDLAKVAIIDNSPQVFRLQVNNGIPIKSWFDDPLDCALMSLLPFLETLVDADDVRPIIAKRYGNKE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1098 447 SMART forpap2 273 417 IPR004274 -
Aed4g1098 447 Gene3D - 260 443 IPR023214 -
Aed4g1098 447 CDD HAD_FCP1-like 276 407 - -
Aed4g1098 447 ProSiteProfiles FCP1 homology domain profile. 270 429 IPR004274 -
Aed4g1098 447 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 130 445 - -
Aed4g1098 447 PANTHER SCP1-LIKE SMALL PHOSPHATASE 4-RELATED 130 445 - -
Aed4g1098 447 Pfam NLI interacting factor-like phosphatase 276 436 IPR004274 -
Aed4g1098 447 SUPERFAMILY HAD-like 264 440 IPR036412 -
Aed4g1098 447 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 275 439 IPR011948 GO:0016791
Aed4g1098 447 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 87 - -
Aed4g1098 447 PANTHER SCP1-LIKE SMALL PHOSPHATASE 4-RELATED 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1098 Aed-Chr4 10286821 10299574 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1098 K17616 - gmx:100799803 786.178