Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1088 ATGTCCACCGTTGCCAAGCGCCTCCTCATCAGCCTTGGCGTTGGCCCTACCGTGGTAGAGCTCGACGAGCAGTCCGAAGGCCCCAGCATCCAGTCTGTCCTCCACCAGCTTGCCGGGTCGACACACCAGCCCGTACCCGCTGTCTTCGTCGGGGGCAAGTTTCTTGGCGGGGTGCAGACCCTCATGGCCAGCCATATAAACGGCACTCTGGTTCCTCTCCTCAAAGATGCTGGGGCTCTCTGGCTGTGA 249 0.6185 MSTVAKRLLISLGVGPTVVELDEQSEGPSIQSVLHQLAGSTHQPVPAVFVGGKFLGGVQTLMASHINGTLVPLLKDAGALWL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1088 82 SUPERFAMILY Thioredoxin-like 2 81 IPR036249 -
Aed4g1088 82 Gene3D Glutaredoxin 1 81 - -
Aed4g1088 82 PANTHER GLUTAREDOXIN 1 82 IPR011905 -
Aed4g1088 82 CDD GRX_GRXh_1_2_like 1 73 - -
Aed4g1088 82 ProSiteProfiles Glutaredoxin domain profile. 1 81 - -
Aed4g1088 82 Pfam Glutaredoxin 2 54 IPR002109 -
Aed4g1088 82 PANTHER GLUTAREDOXIN-C9 1 82 - -
Aed4g1088 82 TIGRFAM GlrX-like_plant: glutaredoxin-like family 1 82 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1088 Aed-Chr4 10199744 10199992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1088 1 82 Miscellaneous Gene Families AT4G15700 51.220 1.50e-22 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1088 K03676 - gmx:100775537 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1088 4 10199744 10199992 Aed4g1088 4 10199744 10199992 ECH