Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1086 ATGGAAGGAGGAGTGCCAGAAGCTGATGTCTCTGCCTTCAGAGAATGTTTGTCTCTATCATGGAAGAATCCTTATGTTCTTCGCCTTGCTTTCTCTGCTGGAATTGGAGGCTTTCTCTTTGGCTATGACACTGGAGTAATATCTGGAGCTCTTTTGTACATCAGAGATGATTTCGAAGAGGTGGATAGAAAGACGTGGCTGCAGGAAGCTATAGTGAGCATGGCACTTGCTGGAGCAATCATAGGAGCTTCAGTTGGGGGATGGATCAACGATCGATTCGGGAGAAAAAGGGCAATCATTTTAGCAGACACACTCTTTTTCATTGGATCGATTCTTATGGCTTCTGCAACCAACCCAGGTGTTCTGATTGTTGGTCGAGTTTTCGTTGGCCTTGGTGTTGGAATGGCCTCAATGGCATCACCTTTGTACATCTCAGAAGCATCACCAACAAGGGTTCGAGGTGCCCTTGTTAGCCTCAATGGTTTTCTCATCACTGGAGGACAGTTCCTTTCCTATGTCATCAACTTGGCCTTCACAAGTGGAAAAGAAGAAGAAGCTAAAGAAATTCTAAGAAAGATTTACTCCCCCCATGATGTAGAAGATGAAATCAATGCTTTGAAGGAATCATTAGAAATGGAACTCAATGAACAAGAATCTTCAAACAAAGTCAGCATAATGAAGCTGCTGAAAACCAAAACAGTGAGAAGAGCCCTCTATGCAGGAATGGGCCTTCAAATCTTCCAACAATTTGTAGGAATCAACACAGTCATGTACTACAGCCCCACAATTGTGCAACTAGCAGGTTTTGCATCCAATAGGGTTGCACTGCTCTTATCACTTGTCATTGCAGGGATCAATGCATTTGGGTCCATTTTGAGCATATATTTCATTGACAAAACTGGGAGGAGGAGGCTTTTGTTGTTCAGTTTGTGTGGTGTTGTGGTGTCACTTGTTGTTTTGACTGTGGTTTTTCATGAGACTGCAACTCACTCCCCTATGGTTAGTAATGTTGAAACCTCTCACTTTAACAACAGCACTTGCCCTGGTTACAGTGCTGCTGCTTTGGACACTGGTGAATGGGATTGCATGAAATGCCTCAAGGCTTCTCCAGAGTGTGGCTTCTGTGCTTCTAGAGCTAATAAGTTTCGGCTATGGTACACAAGGGGTTGCCCAAGTGAATATGGCTGGCTTGCCCTAATTGGCCTAGCACTCTACATCCTATTCTTCTCACCAGGCATGGGAACAGTTCCATGGGTTGTCAACTCTGAGATCTACCCTCTAAGGTACAGAGGAATCTGTGGAGGAATAGCATCTACCTCAAATTGGGTTTCTAATCTCATTGTGGCACAGTCCTTTCTGTCCTTAACACAAGCCATTGGGACCTCATACACATTCATGATGTTCATATTCATCAGTGTTGCTGCCATTGTGTTTGTCATTGTTTTTGTGCCTGAAACCAAAGGGCTCCCAATTGAGGAGGTGGAGAACATGCTCGAATCTAGGTCTTTGAAGTTCAAATTTTGGCAAAGAAGTCATGATCACTCTAGTGAAGTAGTACCAAAGCAGAAGAAGAATCAAGTAATTTCCCATTGA 1593 0.4369 MEGGVPEADVSAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFEEVDRKTWLQEAIVSMALAGAIIGASVGGWINDRFGRKRAIILADTLFFIGSILMASATNPGVLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTSGKEEEAKEILRKIYSPHDVEDEINALKESLEMELNEQESSNKVSIMKLLKTKTVRRALYAGMGLQIFQQFVGINTVMYYSPTIVQLAGFASNRVALLLSLVIAGINAFGSILSIYFIDKTGRRRLLLFSLCGVVVSLVVLTVVFHETATHSPMVSNVETSHFNNSTCPGYSAAALDTGEWDCMKCLKASPECGFCASRANKFRLWYTRGCPSEYGWLALIGLALYILFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTSNWVSNLIVAQSFLSLTQAIGTSYTFMMFIFISVAAIVFVIVFVPETKGLPIEEVENMLESRSLKFKFWQRSHDHSSEVVPKQKKNQVISH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1086 530 CDD MFS_HMIT_like 32 485 - -
Aed4g1086 530 Gene3D MFS general substrate transporter like domains 20 179 IPR036259 -
Aed4g1086 530 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1086 530 PRINTS Sugar transporter signature 399 420 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1086 530 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1086 530 PRINTS Sugar transporter signature 422 434 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1086 530 PRINTS Sugar transporter signature 248 258 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1086 530 Coils Coil 200 220 - -
Aed4g1086 530 Gene3D MFS general substrate transporter like domains 373 506 IPR036259 -
Aed4g1086 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 487 IPR020846 GO:0022857
Aed4g1086 530 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 179 - -
Aed4g1086 530 PANTHER GENERAL SUBSTRATE TRANSPORTER 178 512 - -
Aed4g1086 530 SUPERFAMILY MFS general substrate transporter 18 495 IPR036259 -
Aed4g1086 530 Gene3D MFS general substrate transporter like domains 180 342 IPR036259 -
Aed4g1086 530 Pfam Sugar (and other) transporter 392 497 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g1086 530 Pfam Sugar (and other) transporter 30 178 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g1086 530 Pfam Sugar (and other) transporter 180 329 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g1086 530 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed4g1086 530 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 179 - -
Aed4g1086 530 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 178 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1086 Aed-Chr4 10182036 10188189 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1086 1 525 Organic Solute Cotransporters AT1G30220 64.041 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1086 K08150 - gmx:100783605 865.144