Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1082 ATGGAAGGAGGTGTACCAGAAGCAGACATGTCTGCCTTCAGAGAATGTTTGTCTCTATCATGGAAGAATCCTTATGTTCTTCGCCTCGCTTTCTCTGCTGGAATTGGAGGCCTTCTCTTTGGTTATGACACTGGAGTTATATCTGGGGCTCTTTTGTATATCAGAGATGAATTCAAAGCAGTTGATAGGAAAACTTGGCTACAGGAAGCAATAGTGAGTACTGCAATAGCAGGAGCAATCATAGGAGCATCAGTTGGAGGATGGATCAACGACCGATTCGGAAGAAAGAAAGGAATTGTTTTAGCAGACACCCTCTTTTTCATAGGGTCTGTTATCATGGCGGCTGCACCAAGCCCAGCAATTCTCATAGTTGGTCGCGTGTTTGTTGGCTTTGGCGTTGGCATGGCTTCAATGGCATCACCACTCTACATCTCGGAGGCTTCACCAACAAGAGTGAGAGGAGCACTTGTGAGCCTCAACAGTTTTCTCATCACTGGGGGACAGTTCCTCTCTTATCTCATCAACTTGGCCTTCACCAAGGCACCAGGGCCATGGAGGTGGATGTTAGGGGTAGCAGCAGTGCCAGCTTTGCTACAAATCATTCTAATGTTGACACTCCCCGAATCGCCTCGTTGGCTGTACCGCAAGGGTAAGGAGGAGGAAGCGAAATCGATCCTGAAGAAGATTTACCCGCCACACGAAGTCGATGGCGAGATCCAGGCCTTGAAGGAATCAGTAGACATGGAAATCAAGGAAGCAGAATCATCAGAGAAGATCAACATAGTCAAACTCTTGAGAACTCCAGCAGTGAGAAGAGGCTTGTATGCAGGAGTTGGCCTATTAGTCTTCCAGCAGTTTGTGGGAATCAACACTGTGATGTATTACAGTCCAACAATTGTTCAGTTGGCTGGTTTTGCATCTAACAGAACAGCATTGCTTCTGTCACTCATCACTGCTGGCCTCAATGCATTTGGCTCAATTCTCAGCATTTACTTCATTGACAAGACTGGGAGGAAGAAGCTTGCTCTGATAAGTTTGTGTGGTGTTGTGTTCTCTCTTGCTATTCTAACTGTTGCTTTTCGCGAAAGTGAAATCCACTCTCCTATGGTGAGCTCCTTGCAATCCTCTCAGTTCAGCAGCAACAACACTTGCCCTGATTACAGAACTGCTTTGAATCCTGCTGAATGGAATTGCAAGACTTGTCTAAAGGCTTCACCAGATTGTGGCTTTTGTGCTGCTGATGACAAGCTTTTACCTGGGGCATGTTTGATATCCAATGATGACACAAAGGCACTATGTGGCAATGATCATAGGGCATGGTACACTAGAGGGTGTCCTAGCAAATATGGTTGGGCTGCACTAATAGGCCTTGCACTCTACATCATATTCTTCTCACCAGGCATGGGAACAGTTCCTTGGGTTGTGAACTCTGAAATCTACCCTCTAAGGTACAGAGGAATCTGTGGAGGAATAGCATCCACAACAGTTTGGATTTCCAACCTCATTGTCTCTGAGTCCTTCTTGTCCCTAACTGATGCCATTGGGACAGCATGGACATTCATGATGTTTGGGATTGTGGCTGTTGTGGCAATCTTCTTTGTCATTATTTTTGTGCCTGAGACCAAAGGGGTGCCTATGGAGGAAGTGGAGAAGATGCTGGAGCAAAGATCCGTGCAGTTCAAGTTTTGGAAAAAGAGAGATTCTGGCTCTGAGAAGCATTGA 1722 0.4605 MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFKAVDRKTWLQEAIVSTAIAGAIIGASVGGWINDRFGRKKGIVLADTLFFIGSVIMAAAPSPAILIVGRVFVGFGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGPWRWMLGVAAVPALLQIILMLTLPESPRWLYRKGKEEEAKSILKKIYPPHEVDGEIQALKESVDMEIKEAESSEKINIVKLLRTPAVRRGLYAGVGLLVFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITAGLNAFGSILSIYFIDKTGRKKLALISLCGVVFSLAILTVAFRESEIHSPMVSSLQSSQFSSNNTCPDYRTALNPAEWNCKTCLKASPDCGFCAADDKLLPGACLISNDDTKALCGNDHRAWYTRGCPSKYGWAALIGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTTVWISNLIVSESFLSLTDAIGTAWTFMMFGIVAVVAIFFVIIFVPETKGVPMEEVEKMLEQRSVQFKFWKKRDSGSEKH 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1082 573 SUPERFAMILY MFS general substrate transporter 18 551 IPR036259 -
Aed4g1082 573 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 573 - -
Aed4g1082 573 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 365 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1082 573 Gene3D MFS general substrate transporter like domains 431 561 IPR036259 -
Aed4g1082 573 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 573 - -
Aed4g1082 573 CDD MFS_HMIT_like 32 540 - -
Aed4g1082 573 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed4g1082 573 Pfam Sugar (and other) transporter 30 360 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g1082 573 Pfam Sugar (and other) transporter 449 552 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed4g1082 573 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 542 IPR020846 GO:0022857
Aed4g1082 573 Gene3D MFS general substrate transporter like domains 20 376 IPR036259 -
Aed4g1082 573 PRINTS Sugar transporter signature 454 475 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1082 573 PRINTS Sugar transporter signature 477 489 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1082 573 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1082 573 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed4g1082 573 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1082 Aed-Chr4 10142462 10148142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1082 1 573 Organic Solute Cotransporters AT1G30220 70.711 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1082 K08150 - gmx:100796800 1043.88