Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1080 ATGGCAACCACTGTGATGACCACTCTCCCACAGTTCAATGGTTGCTGTCCAACCCATGAGGCGCAAGGGGAAGGGTGCTTTGGGAGCTCGATGTTTGGACTGGCTCCATCAGCAAACAGGAAAGCCACAGCAGGGCTAAAGCTGGAGGTGAGGGACTCAGGCTTGCAGACTGGTGACCCTGCTGGCTTCACCCTTGCTGACACCTTGGCCTGTGGCTCTGTTGGCCACATCATTGGTGTTGGTGTTGTTCTTGGCCTCAAGAACATTGGTGCCCTGTAA 279 0.552 MATTVMTTLPQFNGCCPTHEAQGEGCFGSSMFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKNIGAL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1080 92 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC 30 92 - -
Aed4g1080 92 Gene3D - 26 92 IPR023618 GO:0009522|GO:0015979
Aed4g1080 92 TIGRFAM PS_I_psaK_plant: photosystem I reaction center PsaK 30 92 IPR017493 -
Aed4g1080 92 Pfam Photosystem I psaG / psaK 35 90 IPR000549 GO:0009522|GO:0015979|GO:0016020
Aed4g1080 92 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 60 86 IPR035982 GO:0009522|GO:0015979|GO:0016020
Aed4g1080 92 ProSitePatterns Photosystem I psaG and psaK proteins signature. 62 79 IPR000549 GO:0009522|GO:0015979|GO:0016020
Aed4g1080 92 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 30 92 IPR016370 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1080 K02698 - gmx:100527056 122.479