Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1074 ATGGCTTGCGTGAAATTGGGTTCCAAAGCTGATGCTTTCCAGCGTCAAGGACAGGCCTGGTTTGGTGGAAAGGAAAAGTTCTGCACGACTGGGCTTCCTAGTGATATAGTTGTTGAAGTTGGAGAGATGTCCTTTCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTGGGGTTCTAGAAAGGATGATTGCCGAGGCTTCTGAACCAGAGGAAGAATGTGTGATAGCCCTCAGTGACATTCCTGGAGCGGCCAAAACATTTGAACTTGTGGCAAAATTCTGCTACGGTGTGAAACTTGAACTCACAGCATCAAATGTTGTGTACCTCTGGTGTGCCGCGGAGCGTCTTGAAATGACTGAGGAATACGGTGAGGGTAATCTCATTTCACAGGCTGAAACCTTTTTCAATCAAGTGGTCCTCCGCAGTTGGAAAGACTCTCTGAGGGCACTTCAAACCTGTGACGATGTTTCGGCCCATGCTGAAGAGCTCCACATTGTGAAAAGATGCATCGAATCACTGGCAGCAAAGGCGTCCACTGACCCGAATTTATTTGGGTGGCCAGTGCTGGAGCGTGGCGGTCCTTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACCGGAGCAAGACCAAAAAACTCAAGTTTAGATTGGTGGTACGAGGATGTAACGAATTTGAGTTTACCTCTTTATAAGAGCTTGATAGATGTCATGGAATCTCGAGGCATCAGGCAGGAGATTATTGCCGGCTCTCTTTCTTTCTATGCTAAAACATATCTGCCTGGATTAAATCGACGTCAGGTTTCTGGTGAGTCCAGTTCCCGTCTGTCACAGGTAGCTATGGTGTCTCCACTATCTGAAGACAACCAGAAGATTCTACTGGAAGAGATTGATGGATTGCTCCCAATGCAGAAGGGCCTGGTCCAAACAAAGTTCTTGTTTGGTCTACTACGAACAGCCATGATTCTACGATCTCACCCATGGTTAGTGGAGTCAGAGAGAGAGCAACTATGTAGGCTGATGGATTGCCAGAAGCTCTCATTAGAAGCATGCACTCACGCCGCACAGAACGAGAGGCTGCCCATCAGAATAATAGTCCAAGTTCTGTTTTTCGAGCAGCTCCAGCTCCGCACCTCGATCGCTGGCTGCTTCCTAGTCTCGGATAACCTCGACGGCGGATCGAGGCAGTTGAGAAGCGGCTTTGTCGGGTCCACGGAGGGTGGCTGGGCGTCGGCCGTGAAGGAAAACCAGGTCTTGAAGGTGGGGATGGACAACATGAGGATGCGGGTGTCCGAGCTCGAGAAGGAGTGCTCGAACATGAGGCAGGAGATCGAGAAGCTGGGCCGCCCGAAGGGATCGAGTGCCTGGGGGACCGTGTCAAAGAAACTAGGGTTCAGGTTGAAGTCTCAGATGTGCAGTGCTCAGGAAGGGTCAGTTAGCAACCAGAACAATGCAAATAGTAGTAGCAAGGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAAGAGTTCCTCTATTAGTAGTGACAAAGCATCAGTGTCTTCAATTGTTCATGCGTAG 1569 0.4908 MACVKLGSKADAFQRQGQAWFGGKEKFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERMIAEASEPEEECVIALSDIPGAAKTFELVAKFCYGVKLELTASNVVYLWCAAERLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALQTCDDVSAHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSLDWWYEDVTNLSLPLYKSLIDVMESRGIRQEIIAGSLSFYAKTYLPGLNRRQVSGESSSRLSQVAMVSPLSEDNQKILLEEIDGLLPMQKGLVQTKFLFGLLRTAMILRSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGGSRQLRSGFVGSTEGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRPKGSSAWGTVSKKLGFRLKSQMCSAQEGSVSNQNNANSSSKVEKLKERHVKHKKSSSISSDKASVSSIVHA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1074 522 ProSiteProfiles NPH3 domain profile. 323 377 IPR027356 -
Aed4g1074 522 SUPERFAMILY POZ domain 21 120 IPR011333 -
Aed4g1074 522 Coils Coil 418 445 - -
Aed4g1074 522 MobiDBLite consensus disorder prediction 477 522 - -
Aed4g1074 522 Gene3D Potassium Channel Kv1.1; Chain A 15 139 IPR011333 -
Aed4g1074 522 PANTHER - 1 326 - -
Aed4g1074 522 PANTHER - 325 493 - -
Aed4g1074 522 ProSiteProfiles NPH3 domain profile. 219 322 IPR027356 -
Aed4g1074 522 Pfam BTB/POZ domain 32 119 IPR000210 GO:0005515
Aed4g1074 522 MobiDBLite consensus disorder prediction 477 491 - -
Aed4g1074 522 Pfam NPH3 family 325 353 IPR027356 -
Aed4g1074 522 Pfam NPH3 family 219 326 IPR027356 -
Aed4g1074 522 PANTHER OS12G0117600 PROTEIN 1 326 IPR043454 -
Aed4g1074 522 PANTHER OS12G0117600 PROTEIN 325 493 IPR043454 -
Aed4g1074 522 CDD BTB_POZ_NPY3-like 26 128 - -
Aed4g1074 522 ProSiteProfiles BTB domain profile. 34 103 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1074 Aed-Chr4 10065287 10070469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1074 317 509 EF-hand Containing Proteins AT3G44820 38.614 1.49e-34 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1074 - - gmx:100794676 603.979