Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1055 ATGGCAGCATCTGATCCCCAAAAGTTGATGGCCAAAGCTGATAAACTAACAACACTCAGTCTCACGAGGTGGAATGCGGATTGGAAGAGTGCTACTGTTCTTTATGAGCAGGCAGCTAATGGGTTTAGAGTTGCCAAGGACTATGAGAATACCAAAATAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCCTCACCTTGGGATGCAGCTAAGCACATGGAATCTGCTGGTGCGCTAGCAAAGGATCTAAGACACTGGCCAGAAGTTCTGGATTTCTATCGAAGGGCATCTGAATTGTATATTGAGTGTGGGAGACCGCAACTTGCATCAGACGCTCTTGCAAAGGGAGCCCGTGCTTTGGAAGATAGCATGTCTGAAGAAGCTATTCAACTATATACAGATGCTTGTACAATTCTTGAAGATGATGGAAAAGATCAAATGGCCTTTGATCTTTATCGTGCTGCCACTAGTGTTTATATAAAACTTGAAAAATATACAGATGCAGCATCTTTCATGTTGAGATTGGGCTTGGCGGCTGACAAGAGTAATGCTACCAATAGCCAGTCTAAGGCATATCTTAATGCAATTGTTATCTACCTTTATGCCCATGACTATACGCAAGCTGAGAAGTGTTATAATGACTGTTCCCAGATTGATGCTTTTCTGAAAAGTGACCAGAATCGTTGTGCTAGCAACCTACTTGCTGCCTACAAAAGTGGAGATGTTGAAGAAATCAAACGTATTGCTCAGTCGAGTGTTATTTCACATCTTGACAGTGTGCTTGCGAGGAAACTTCCAACAGGCGATGTGAGTGCATTAAAGGCTGAAAATGAAGAGGAGCAACTCGATGAAAATGACCTCACTTAA 873 0.4238 MAASDPQKLMAKADKLTTLSLTRWNADWKSATVLYEQAANGFRVAKDYENTKIAYEKASKGQEMLSSPWDAAKHMESAGALAKDLRHWPEVLDFYRRASELYIECGRPQLASDALAKGARALEDSMSEEAIQLYTDACTILEDDGKDQMAFDLYRAATSVYIKLEKYTDAASFMLRLGLAADKSNATNSQSKAYLNAIVIYLYAHDYTQAEKCYNDCSQIDAFLKSDQNRCASNLLAAYKSGDVEEIKRIAQSSVISHLDSVLARKLPTGDVSALKAENEEEQLDENDLT 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1055 290 Pfam Soluble NSF attachment protein, SNAP 5 250 - -
Aed4g1055 290 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 2 278 IPR000744 GO:0006886
Aed4g1055 290 PANTHER GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN 2 278 - -
Aed4g1055 290 Gene3D Tetratricopeptide repeat domain 2 269 IPR011990 GO:0005515
Aed4g1055 290 Coils Coil 272 290 - -
Aed4g1055 290 SUPERFAMILY TPR-like 6 249 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1055 K21198 - gmx:100776112 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1055 4 9874649 9880935 Aed4g1055 4 9874649 9880935 ECH