Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1029 ATGGGTTTCAAGTCTCTGCTGGCTGTTATGTGTGTTTTGGTTTGGTTTGGATCATTGACTCTTGCAACTTCCAATGATGGGGGTTTGATGAGGATTGGTCTAAAGAGAAGAACTTTAGACTCTCTGAGTCTCAAAGCTGCAAGAATCAAAGAGGGTGTTGTTCTTCATAGGGATTTTGGAGGTGCTAATAAAAATTGTTGTGATGAAGATACAATATATCTCAAGAATTATCTTGATGCACAATATTTTGGGGAGATTAGCATTGGTTCACCTCCACAATACTTCAATGTTGTGTTTGACACCGGAAGCTCGAATCTTTGGATCCCATCTTCCAAATGCATCTTCTCTATTGCTTGCTATTTTCATTCCAAGTATAGGTCGAAGATATCTAGCACGTATACCGAAATCGGAATACCTTGCAAAATCCCTTATGGCCAAGGATCAATTTTTGGATTCTTCAGCCAAGATAATGTACAAGTTGGGGATATCATCATCAAAGATCAAGAATTTGCTGAGATTACAAGAGAAGGATCTTTGGCACTTGCAGCACTTCCATTTGATGGCATACTTGGACTCGGATTCCAGGATACTTCAATCCAACAGAAGAGATGGGGGGGTGAGATTGTCTTTGGTGGAATTGATTACAGGCATTTTAGAGGAGACCACACATATGGTGGCTGTGCTGCAATTGTGGACTCAGGCACATCTTTAATAGCTGGTCCAACTAGTGTTGTGACTCAAATTAACCATGCCATTGGAGCAGAAGGATATATCAGCTTTGAGTGTAAAAGCATTTTTAATCCTGACATCATATGCAGTGACATTGGACTCTGTTCATACAATGGATTTGATACAACACATGATGTTATTGAGACAGTGGTGCATAATCAAAGTTGGAATGCATCACAAACAAGAGAGAGCCCCTTATGCAGTTTTTGCAATATGGTTGTCCTTTGGATCCAAGTTCAGCTTAAGCAAAGCAATGTGAAGGACAAAGTATTAAAATACGTGGATGAGCTGTGTGAGAAGCTCCCGAATCCCCCAGGACAATCATTTATAAACTGCAATAGGATGGCCACTATGCCTCACATTACGTTCACCATTGGAAACAAGTCCTTTCCCCTCTCTCCAGAACAGTATATCCTTCGAGTTGAAGAAGGCTGTTCAACTGTCTGCTATGGCGGTTTTGTTGCAATAGATGTGCCTCCCCCACAGGGTCCTCTCTGGGTTCTTGGAAGTATTTTCTTGGGGGCATATCATACAGTGTTTGATTATGGGAATCTACGTATAGGATTTGCAGAAGCTGCATAG 1311 0.4119 MGFKSLLAVMCVLVWFGSLTLATSNDGGLMRIGLKRRTLDSLSLKAARIKEGVVLHRDFGGANKNCCDEDTIYLKNYLDAQYFGEISIGSPPQYFNVVFDTGSSNLWIPSSKCIFSIACYFHSKYRSKISSTYTEIGIPCKIPYGQGSIFGFFSQDNVQVGDIIIKDQEFAEITREGSLALAALPFDGILGLGFQDTSIQQKRWGGEIVFGGIDYRHFRGDHTYGGCAAIVDSGTSLIAGPTSVVTQINHAIGAEGYISFECKSIFNPDIICSDIGLCSYNGFDTTHDVIETVVHNQSWNASQTRESPLCSFCNMVVLWIQVQLKQSNVKDKVLKYVDELCEKLPNPPGQSFINCNRMATMPHITFTIGNKSFPLSPEQYILRVEEGCSTVCYGGFVAIDVPPPQGPLWVLGSIFLGAYHTVFDYGNLRIGFAEAA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1029 436 Pfam Eukaryotic aspartyl protease 81 201 IPR033121 -
Aed4g1029 436 Pfam Eukaryotic aspartyl protease 226 435 IPR033121 -
Aed4g1029 436 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 225 436 - -
Aed4g1029 436 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 5 201 - -
Aed4g1029 436 SUPERFAMILY Saposin 264 345 IPR011001 -
Aed4g1029 436 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 203 224 - -
Aed4g1029 436 Gene3D Acid Proteases 30 212 IPR021109 -
Aed4g1029 436 Gene3D Acid Proteases 225 436 IPR021109 -
Aed4g1029 436 Gene3D - 257 345 - -
Aed4g1029 436 Pfam Saposin-like type B, region 1 308 345 IPR007856 GO:0006629
Aed4g1029 436 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 97 108 IPR001969 GO:0004190|GO:0006508
Aed4g1029 436 PRINTS Pepsin (A1) aspartic protease family signature 229 240 IPR001461 GO:0004190|GO:0006508
Aed4g1029 436 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Aed4g1029 436 PRINTS Pepsin (A1) aspartic protease family signature 409 424 IPR001461 GO:0004190|GO:0006508
Aed4g1029 436 SUPERFAMILY Acid proteases 29 435 IPR021109 -
Aed4g1029 436 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 225 436 IPR001461 GO:0004190|GO:0006508
Aed4g1029 436 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 5 201 IPR001461 GO:0004190|GO:0006508
Aed4g1029 436 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 203 224 IPR001461 GO:0004190|GO:0006508
Aed4g1029 436 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 229 240 IPR001969 GO:0004190|GO:0006508
Aed4g1029 436 ProSiteProfiles Saposin B type domain profile. 306 347 IPR008139 -
Aed4g1029 436 ProSiteProfiles Peptidase family A1 domain profile. 82 433 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1029 Aed-Chr4 9412878 9417331 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1029 K08245 - gmx:100500551 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1029 4 9412878 9417331 Aed4g1029 4 9412878 9417331 ECH