Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1020 ATGTTAGCTTCTTCGCTCTCATTCCTCAATTCCTCTTCTTCCTCTTCCTTGTTCTCAATTTCGCCACTTTCAAACCCGAAACCCTCTCTGTCTTTCGTGGTCGAAGCCAAAGACAGGACCCGCAGGGAGGACAGAACCGCGCGCCACACTCGCATCAGAAAGAAGGTCGAGGGGACACCGGAGAGGCCGAGGCTGTCGGTGTTCCGGTCAAACAAGCACCTCTCCGTGCAGGTGATTGATGACACCAAGATGCACACGCTCGCTTCGGTTTCCACAATGCAGAAAACGCTTGTTGAAGAATGCAGCTACTCCGCTGGCCCTACACTCGAAGTAGCAAAGAGGATGGGTGAGATCATTGCAAAGTCCTGTTTGGAGAAGGGGATCACAAAGGTGGCCTTTGATCGAGGTGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGAAGCAGCTCGTGAACATGGCCTAGATTTCTAA 477 0.522 MLASSLSFLNSSSSSSLFSISPLSNPKPSLSFVVEAKDRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTKMHTLASVSTMQKTLVEECSYSAGPTLEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1020 158 CDD Ribosomal_L18_L5e 52 156 - -
Aed4g1020 158 Gene3D - 39 158 - -
Aed4g1020 158 SUPERFAMILY Translational machinery components 41 156 - -
Aed4g1020 158 Hamap 50S ribosomal protein L18 [rplR]. 40 158 IPR004389 GO:0003735|GO:0005840|GO:0006412
Aed4g1020 158 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 24 158 IPR005484 GO:0003735|GO:0005840|GO:0006412
Aed4g1020 158 MobiDBLite consensus disorder prediction 1 26 - -
Aed4g1020 158 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 24 158 - -
Aed4g1020 158 TIGRFAM L18_bact: ribosomal protein uL18 42 158 IPR004389 GO:0003735|GO:0005840|GO:0006412
Aed4g1020 158 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 40 158 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1020 K02881 - gmx:100306308 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1020 4 9296140 9298393 Aed4g1020 4 9296140 9298393 ECH