Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1004 ATGGCTGCTGCTACCATATCATGGTCACCATCACCCAAATCCAACACCAATACCATTGTTACTGTTGCCACCACAATCAACAACCTCTTCGACGATTCTCTCATTGAAATCTTCTGCAAGCTCCCATGCAAAACCATCTTCACATGCAAGAGCGTCTCAAAGCGATGGCTCACCCTCATTTCCAATCCCAATTTTCATTCCCTATACTTAACTCATCAACACACCCTCTTTCAAAAAACACAAGCCCTAGGAGAAGACCCTGATCAACAACCTAGTTTTATTCTAAAACCATACAACGCCCTAATCATAGCACCCAATTCACCCTCTCTCCAACTTGGTATTCTCGAAAACCACCTCTCTCTATCTCTCCTAGGCCCGGGTTTCGAACCCACCAATAACATCGCACCTCAATTAAGGTCCGTGTTGAAGTTTGTTTTCGCATGTTCCAACGGTTTACTCGTGTACGGAAACCCTCGTCCACGTCACAAATGCATATACCACGTTCGCAACCCATTCACGAAGAGTTCGTTGGAACTACCTTGTGCGTTAACTCTTTGCGACCACGCTGGTGTTCTCGTGGGTTTCACGTGCGACCCTTATTTCCACGTTGAAACAAAGGTTTTCTACTCCGAGACAGGAAAATGGAAGAGCTTTCTCGTGTCGTGTCCAAAAGGGTTTTCATGCGGTTTTTTTCTCACGGCTTCGAGCGTTGAGCACGAAGGGAAGTTGTACTTCATGGGTGGAGGGACGGTTCTGGTGTACGACCCTTACAATAACGAACGTGAGGCCTCAGTTATCGAGCTTCCACGTGGCTTCGGTGAAGCGTATAGAGGGTGCCTCGGGGTTTCTTGCGGAAAGTTGCAGTGTTCCGAGTTTCCTATTTCACCCTCCAGTGCATTTGGAGCGCATAGTGGAAGAGTTTGGGAATTGAAGACGACGACAACAACGTGGGATTTGGTGCATGAGTTTTGTCTCCCTGAGGTTGTTGGGGCAGGGTTTGAAGAGTTGAAGAGGAACGAGGGTGAATATGTGAAAGGGTGTAGTAGGATTCTGGCTTTTCATCCGTATGTTAGGGACAGTGTGTTTTTTAAGTTTGGTGATAATATCATTTGTTGCAATTTGCGAAGTCGTGAGTTTAAGGTTTCCAAATACGGTGGTCTCTCCTTGCTTTTTTATCCGGTGATCCCAGTTGTGATCCCTTGGTGGCCAACTCCTATTCCAACACTACCCTTGTAA 1236 0.4652 MAAATISWSPSPKSNTNTIVTVATTINNLFDDSLIEIFCKLPCKTIFTCKSVSKRWLTLISNPNFHSLYLTHQHTLFQKTQALGEDPDQQPSFILKPYNALIIAPNSPSLQLGILENHLSLSLLGPGFEPTNNIAPQLRSVLKFVFACSNGLLVYGNPRPRHKCIYHVRNPFTKSSLELPCALTLCDHAGVLVGFTCDPYFHVETKVFYSETGKWKSFLVSCPKGFSCGFFLTASSVEHEGKLYFMGGGTVLVYDPYNNEREASVIELPRGFGEAYRGCLGVSCGKLQCSEFPISPSSAFGAHSGRVWELKTTTTTWDLVHEFCLPEVVGAGFEELKRNEGEYVKGCSRILAFHPYVRDSVFFKFGDNIICCNLRSREFKVSKYGGLSLLFYPVIPVVIPWWPTPIPTLPL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1004 411 Pfam F-box domain 27 66 IPR001810 GO:0005515
Aed4g1004 411 SMART fbox_2 29 69 IPR001810 GO:0005515
Aed4g1004 411 Gene3D - 22 81 - -
Aed4g1004 411 PANTHER OS08G0529300 PROTEIN 25 409 - -
Aed4g1004 411 SUPERFAMILY F-box domain 25 80 IPR036047 GO:0005515
Aed4g1004 411 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 25 409 - -
Aed4g1004 411 SUPERFAMILY Galactose oxidase, central domain 205 320 IPR011043 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1004 - - gmx:102666623 667.922