Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1002 ATGGGTGCTTCAGAGGAGACTAGTGCACTGTTCCCAATATTCATTTTGACAATAATGGCCATTCCTATAGTGCCATATACAATAACAAAATTGTGCCGTTTTGCCAGTAAGAAATCAAAGAGCATACACTGTCACTGCTCCGAGTGCGGGCGGTCAGGGAAGTACCATAAATCGATATTCAAGAGGATTTCGAATGTCTCAACCTGTAGTAACTTGACATTGTTACTACTTTGGGGGGTTATGATTGTCCTGGTTTATTACATAAAGACCATGAGTCGTGAGATTGAAATTTTCGATCCATTTAATATTCTAGGATTAGAGCCTGGAGCAGCAGAGTCTGAAATAAAGAAAAAGTATAGGAGACTTTCTATTCAATACCATCCGGATAAAAATCCAGATCCAGAGGCACACAAGTACTTTGTTGAGTACATTGCCAAAGCTTATCAAGCTCTTACAGATCCAACAGCTCGTGAAAATTATGAAAAATATGGCCATCCTGATGGCAGGCAGGGATTTCAAATGGGTATAGCTCTTCCTCAATTCCTGCTAAATATTGATGGGGCATCTGGTGGAATACTTCTGCTTTGGATTGTTGGTGTGTGCATTCTCTTGCCATTGGTCATTGCTGTTGTTTATCTCTCCAGATCATCAAAGTATACCGGCAACTATGTGATGCATCAAACACTTTCCACTTACTATTACCTCATGAAGCCTTCTTTGGCCCCCAGCAAAGTCATGGATGTCTTCATCAAGGCTGCTGAATACATGGAAATTCCAGTTCGTAGGACTGATGATGAACCTCTTCAGAAGCTTTTTATGTTGGTAAGGAGTGAGTTGAATCTTGACCTCAAGAACATCAAGCAGGAGCAGGCTAAGTTTTGGAAGCAGCATCCTGCACTGGTTAAGGTATCTTCTTGTATGGCTAAGCCTAATGAAGTGCTTCATATTTTTTTCTGGGAACACAGTGTTCTATTCTGCTTTCTCAGCCCTCTATGTGCTCACATATATGCTATTCCCTTTCAGACAGAGCTGTTAGTTCAAGCTCAGTTGACCCGTGAATTTGCAGTCTTGTCTCCATCTTTACAAAGTGATTTCAGACGAATTTTAGAAACAGCACCCCGCCTTCTTGAAGAATTAATGAAGATGGCAGTTATACCGCGGAATGCTCAGGGACATGGATGGCTGAGGCCTGCAGTTGGTGTTGTTGAGCTTTCTCAATATATCATCCAGGCTGTTCCTCTCAGTGCTAGGAAGTCTACTGGTGGATCACCTGAAGGAATTGCACCATTTCTGCAGTTGCCACATATTAGTGAGACTATTATTAAGAAGGTGGCCCGCAAGAAGGTGAGAACATTTCAGGAACTTCATGAAATGGACTCGCAGGAGCGAGCTGACCTGCTTATTCAAATAGGTGGGCTATCTACTGCTGAAGTGCAAGACATTGAGACTGTACTGGACATGATGCCTTCCTTGACACTTGAAGTAACATGTGAGACTGAAGGTGAAGAGGGCATACAAGAGGGAGACATTGTGACTCTCCATGCTTGGATAAATGTTAAAAGAGGCAATGGTCTGATTGGTGCTCTTCCTCATGCCCCCTACTACCCATTTCACAAGGAAGAAAATTACTGGTTTTTGCTTGCGGATTCTGTTTCAAACAACGTGTGGTTTTCTCAGAAGGTTAGTTTCATGGATGAAGCTACTGCAGTAACAGCTGCATCTAAGGCAATTGAGGAGTCTATGGAGGGGTCAGGAGCAAATGTGAAGGAGACCAGTAAGGCAGTTGCAGAAGCAGTTGAGAAGGTGAAAGGGGGCTCTAGATTAGTTCTGGGCAAGTTCCAGGCCCCATCAGAGGGTAACTACAGTATGACTTGCTATTGCTTGTGTGATTCTTGGTTGGGCTGTGACAGAAGGACAAACTTAAAGCTCAAAGTTTTGAAACGGACTCGGGCTGGCACCAGGGGTGCTGTTTTGGCTGAGGAAGGACCTATCATGGAGGATGGAGTCGAGGAGGATGAGGACAATGAGGATGGAGAGTATGATGACGACTACGAGAGCGAGTACAGTGAAGATGAAGAAGATGATCAGAACACAAAAACGAAGCAACAAGCTGCCAATGGGATCGTGAATAAACATGGTAAAGCTGCAGAAAGTTCAGGCTCTGATGAAGAATGA 2175 0.4359 MGASEETSALFPIFILTIMAIPIVPYTITKLCRFASKKSKSIHCHCSECGRSGKYHKSIFKRISNVSTCSNLTLLLLWGVMIVLVYYIKTMSREIEIFDPFNILGLEPGAAESEIKKKYRRLSIQYHPDKNPDPEAHKYFVEYIAKAYQALTDPTARENYEKYGHPDGRQGFQMGIALPQFLLNIDGASGGILLLWIVGVCILLPLVIAVVYLSRSSKYTGNYVMHQTLSTYYYLMKPSLAPSKVMDVFIKAAEYMEIPVRRTDDEPLQKLFMLVRSELNLDLKNIKQEQAKFWKQHPALVKVSSCMAKPNEVLHIFFWEHSVLFCFLSPLCAHIYAIPFQTELLVQAQLTREFAVLSPSLQSDFRRILETAPRLLEELMKMAVIPRNAQGHGWLRPAVGVVELSQYIIQAVPLSARKSTGGSPEGIAPFLQLPHISETIIKKVARKKVRTFQELHEMDSQERADLLIQIGGLSTAEVQDIETVLDMMPSLTLEVTCETEGEEGIQEGDIVTLHAWINVKRGNGLIGALPHAPYYPFHKEENYWFLLADSVSNNVWFSQKVSFMDEATAVTAASKAIEESMEGSGANVKETSKAVAEAVEKVKGGSRLVLGKFQAPSEGNYSMTCYCLCDSWLGCDRRTNLKLKVLKRTRAGTRGAVLAEEGPIMEDGVEEDEDNEDGEYDDDYESEYSEDEEDDQNTKTKQQAANGIVNKHGKAAESSGSDEE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1002 724 Pfam Sec63 Brl domain 341 641 IPR004179 -
Aed4g1002 724 Gene3D - 428 487 - -
Aed4g1002 724 Pfam Sec63 Brl domain 222 292 IPR004179 -
Aed4g1002 724 SMART dnaj_3 98 156 IPR001623 -
Aed4g1002 724 SUPERFAMILY Sec63 N-terminal domain-like 244 489 - -
Aed4g1002 724 MobiDBLite consensus disorder prediction 664 693 - -
Aed4g1002 724 PRINTS DnaJ domain signature 101 119 IPR001623 -
Aed4g1002 724 PRINTS DnaJ domain signature 136 156 IPR001623 -
Aed4g1002 724 PRINTS DnaJ domain signature 119 134 IPR001623 -
Aed4g1002 724 PRINTS DnaJ domain signature 156 175 IPR001623 -
Aed4g1002 724 PANTHER DNAJ PROTEIN ERDJ2-LIKE 1 304 - -
Aed4g1002 724 PANTHER DNAJ PROTEIN ERDJ2-LIKE 341 717 - -
Aed4g1002 724 SUPERFAMILY Chaperone J-domain 95 192 IPR036869 -
Aed4g1002 724 Gene3D - 225 412 - -
Aed4g1002 724 ProSiteProfiles dnaJ domain profile. 99 164 IPR001623 -
Aed4g1002 724 SMART Sec63_2 209 643 IPR004179 -
Aed4g1002 724 Gene3D DnaJ domain 98 182 IPR036869 -
Aed4g1002 724 Gene3D C2 domain 492 652 IPR035892 -
Aed4g1002 724 MobiDBLite consensus disorder prediction 657 724 - -
Aed4g1002 724 Pfam DnaJ domain 99 161 IPR001623 -
Aed4g1002 724 CDD DnaJ 99 153 IPR001623 -
Aed4g1002 724 PANTHER SEC63 DOMAIN-CONTAINING 1 304 - -
Aed4g1002 724 PANTHER SEC63 DOMAIN-CONTAINING 341 717 - -
Aed4g1002 724 SUPERFAMILY E set domains 493 647 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1002 Aed-Chr4 9193992 9202257 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1002 K09540 - gmx:100809969 1247.65