LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g0996	ATGACCGCATCCAACAAGAAAAACCACAAGGAGAAACCAATTCGCCGCAAACCGGAAGAGAAACCGGAAGAACCGGATTTGCCGAAGTACAGAGATCGAGCTAAAGAGCGCAGAGAGGATCAGAATCCTGATTATGAACAAACCGAGCTTGGATTCCATGCAGTTGCTCCACCTGGTACTGAAGACCAACAAGTGTCAATTCGCACAGCAACTGCAAAGTCAGTTTATCAGTGGATGGTCAAGCCTCAGACCATTAGTAAGACAAATGAGATGTTCCTCCCTGGTCGAATGACATTTATTTATAACATGGAGGGTGGATACCATCATGATATTCCAACAACCCTGCACCGTAGTAAAGCTGACTGTCCAGTGCCAGAGGAAATGGTTACTGTTAATGTTGATGGATCTGTTCTAGATCGAATTGCTAAAATAATGTCATATCTTCGTCTTGGTTCTTCTGGGAAGATCCTAAAGAAGAAAAAGAAGGAAAAGGATTCAAAAGGGAAGATTTTGGCTGTTGGTAATGGATATGACAAAGAGGATAAGCCATTAAAATTTGAAGGTGGGGCAAAAAATCAAACTGAAAAAGAAATCATCCCACCTCCTCCACCACCCATAAAGAAAAATCCTCTTCATTCAAGAGAGAAACAAGGCCCAGCTGTTGCTAGAACAGATGATGATGACATTTTTGTAGGTGATGGGGTTGACTATGATGTACCTGGTAAAGACTTGAGCCAAAGTCCTGTCTCTGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAATCTTCATATTTCACAGAACCTGCTTATGGTCCTGTCCCACCTTCAATGGTTCCTCAAGGGGAATGGCAAGAAACAAATGGATATGATGTAATGCAAACACAAGCCTTGGCTGCTGGCTACCCAGAGTGGCAGGATTACCAGTATGCTGAGCAACAACTGGCTTACCCAGATCAATATCTTCAGCAGACTTATGATGTGCAAGCAGATTTAACTCTTCCACAAGATCCACGCTTTATGACACAAGAAGAAAAGGATCGAGGCTTAGGATCAGTGTTTAAGCGAGATGACCAGAGGCTTCAACAGCTGAGGGAGAAAGATGCTCGTGAAAAAGATCCCAACTTCATCTCAGAGAGTTACTCTGAATGTTACCCAGGATATCAAGAATATAACCGGGAGATAGTGGACAGTGATGATGAAGATGACTTGTCCAAAATGGATATGGGTGGAAGGGCAAAGGGTCGTCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCAACTTACAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTCGGTGTGAAGATGCAAGACGGCAGGAAGACACGAAAGCAAAACAAGGACCAGAAGCTCAACAATGATTTGCACAAGATCAACAAGATACTTGCCAGAAAGAAGATGGAAAAGGACACGAATGGTGAGGGGGGCCACCATTATGATGATGAACCAACACCTGGAAAGAAGCTTCGAATATGA	1515	0.4343	MTASNKKNHKEKPIRRKPEEKPEEPDLPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTEDQQVSIRTATAKSVYQWMVKPQTISKTNEMFLPGRMTFIYNMEGGYHHDIPTTLHRSKADCPVPEEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDSKGKILAVGNGYDKEDKPLKFEGGAKNQTEKEIIPPPPPPIKKNPLHSREKQGPAVARTDDDDIFVGDGVDYDVPGKDLSQSPVSEDMEESPRNKEKSSYFTEPAYGPVPPSMVPQGEWQETNGYDVMQTQALAAGYPEWQDYQYAEQQLAYPDQYLQQTYDVQADLTLPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEKDTNGEGGHHYDDEPTPGKKLRI	504

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g0996	504	MobiDBLite	consensus disorder prediction	1	46	-	-
	Aed4g0996	504	MobiDBLite	consensus disorder prediction	1	62	-	-
	Aed4g0996	504	MobiDBLite	consensus disorder prediction	209	230	-	-
	Aed4g0996	504	MobiDBLite	consensus disorder prediction	181	283	-	-
	Aed4g0996	504	MobiDBLite	consensus disorder prediction	478	504	-	-
	Aed4g0996	504	PANTHER	PROTEIN RED	62	503	-	-
	Aed4g0996	504	PANTHER	PROTEIN RED	6	66	-	-
	Aed4g0996	504	Pfam	RED-like protein C-terminal region	381	487	IPR012492	-
	Aed4g0996	504	Pfam	RED-like protein N-terminal region	6	63	IPR012916	-
	Aed4g0996	504	Pfam	RED-like protein N-terminal region	61	161	IPR012916	-
	Aed4g0996	504	PANTHER	RED PROTEIN IK FACTOR CYTOKINE IK	62	503	IPR039896	-
	Aed4g0996	504	PANTHER	RED PROTEIN IK FACTOR CYTOKINE IK	6	66	IPR039896	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g0996	K13109		-	gmx:100526981	802.357

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g0996	4	9148999	9154308	Aed4g0996	4	9148999	9154308	ECH