Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0994 ATGGCGTCGTCGGAGAATGAACCTTTTTCTCACTCTCCTCCTTCTCCTCCTGCGCACGCGTGTTTGCATAAGTTCAGGCTCTATGAGACTCTATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACTTATTGGAGAGTGTTAAAGATTGACCGTCTAGATCCCTCTGAGCTGAATGTGCTTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGACCTGTTGAGGCGTATACATGAGGGGAACAGGTCCACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATAAAATTTTTGGGCCCTTACTACATGCTGCTTATCACAAAAAGAAAGCAAATTGGTGCAATCTGTGGTAATACAGTATATGCTGTCTCAAAGAGTGAGATGATTCCACTGCAAAATTCTTCTGTTCATTCTAACATCGCTGAATCTATAAATGAAAACAGATACAAGAAGCTCCTATGCATGGTGGACCTTACAAAGGATTTCTTTTTTAGCTACTCATATCAAATAATGCGTAGTCTTCAAAAGAATTTGTGTGATAGTGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTCTGGAATGAGTTTTTAACTCGAGGAATTAGGAATCACCTCAAGAATACTAGTTGGACAGTTGCACTAGTGTACGGCTTTTTTAAACAGGAAACACTTATAATATCTGAGCGAGAGTTAATACTTACACTCATTGCAAGACGGTCTCGCCATTATGCTGGCACTAGGTATTTGAGACGTGGTGTAAATGATAAGGGTAGAGTAGCTAATGACGTGGAAACAGAACAAATTGTATTTGAGGATGTTCCTGAAGGTCTTCCAGTTCAAATATGCTCTGTTGTCCAGAATCGGGGTTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGTCTAAATCTTAAGCCGGATATTATATTGTCAAAGAAGGATCCAAACTATCAAGCCACTAGACTTCACTTTGAAAATCTTGTCAAAAGATATGGGAATCCTGTTATAATTTTGAATTTGATTAAGTCACATGAGAGAAAACCTCGAGAGTCCATACTTCGTTCTGAGTTTGGTAAGGCTATTGATCTCATTAACAAAGAGTTATCACAGGAGAACAGGTTGAGGTTTCTTCATTGGGATCTTAAACATTTTCAGAGCAAAGCTACAAATGTTTTGCTACTTCTGGGAAAAGTGGCAGCATATGCTTTGACATTAACAGACTTTTTATATTGTCAAGTGCCACCAACTCCTAGACCCGAAGACTGTATAAAATGTCCATCTATTAGTTTTGCATACGGCAATATCGATAAGGGAAGCTTTCAACCCACAAGACAAGATGATGTTGACAATGAAGATGGTAATACTTTAGAAAGGAAACCTAGTGGAGAAAACAACCTTGCTAACGGAAACCATTTTATCAAGCCGCCCATGTTCCAGACGGGGGTTCTCAGAACCAATTGTATAGACTGCTTAGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTTCACGCTCTGGGAATTATTGACCACCCGAAAATTGACCTTGATGATCCTCTAAGTGATGATTTGATGGAATTTTATGAGCGGATGGGTGACACTCTTGCACACCAGTATGGTGGTTCTGCTGCACACAAGAAGATATTCTCTGAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAAGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAATGCTTACATGGATGCTGAGAAGCAAAATGCAACTAACATGTCATTTGTCAAAAGGTGTTTCTCAGATGGAAGCATCATTGGTGGCAATTCTACACCCATGTCAACCCCAAACCCAAAGCTTGAAAAATTCTCAAAGGTAGGTTTGCAGGACCGATCAGAAGAAGGAAGCAGGGCTTTTTGTGAGTCACCTGAGATATCATTTTCTTCTGAGACTGAGAGTGGCATGTCATTTTCAAGGTACACTCCTTCAATGCCTCACAGACAGCTTTTTGGAGACATACAAAGAGAGCGCTTCTTTAGTGACCATATTTCCTATTCTGAACATGGGAATTCATTCAGCTGTTCCAACTTTGTTGACCTGGATTGGCTGTCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATTTGAGAGGTTATCAATTACAAACTCTTCGATTGCTGGGCTTTCTTCAGAAAATGTTATCAATGGAGTTATTATGGGAGGAGATACTCCCTCCACTAGTGATTTGGACTCAAACACCAAGGGAAGGGAACGAACTGGGTCAGAGTTATCCTACCGTGGTGCCCAGTCCAAAGTTCTAGAGGATTTTCCTGATACTTTTGTAAACTGGGTGACTAATGGACAGACACTTTGCAACTGA 2412 0.4088 MASSENEPFSHSPPSPPAHACLHKFRLYETLSNFYMIGRDKSRTYWRVLKIDRLDPSELNVLEDSTTYTESECSDLLRRIHEGNRSTGGLKFVTTCYGIVGFIKFLGPYYMLLITKRKQIGAICGNTVYAVSKSEMIPLQNSSVHSNIAESINENRYKKLLCMVDLTKDFFFSYSYQIMRSLQKNLCDSETGHVLYETMFVWNEFLTRGIRNHLKNTSWTVALVYGFFKQETLIISERELILTLIARRSRHYAGTRYLRRGVNDKGRVANDVETEQIVFEDVPEGLPVQICSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDPNYQATRLHFENLVKRYGNPVIILNLIKSHERKPRESILRSEFGKAIDLINKELSQENRLRFLHWDLKHFQSKATNVLLLLGKVAAYALTLTDFLYCQVPPTPRPEDCIKCPSISFAYGNIDKGSFQPTRQDDVDNEDGNTLERKPSGENNLANGNHFIKPPMFQTGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHPKIDLDDPLSDDLMEFYERMGDTLAHQYGGSAAHKKIFSERRGQWKAATQSQEFFRTLQRYYSNAYMDAEKQNATNMSFVKRCFSDGSIIGGNSTPMSTPNPKLEKFSKVGLQDRSEEGSRAFCESPEISFSSETESGMSFSRYTPSMPHRQLFGDIQRERFFSDHISYSEHGNSFSCSNFVDLDWLSSSGNSCEEEPFERLSITNSSIAGLSSENVINGVIMGGDTPSTSDLDSNTKGRERTGSELSYRGAQSKVLEDFPDTFVNWVTNGQTLCN 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0994 803 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 3 604 - -
Aed4g0994 803 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 604 802 IPR043573 GO:0043813|GO:0046856
Aed4g0994 803 MobiDBLite consensus disorder prediction 751 775 - -
Aed4g0994 803 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 3 604 IPR043573 GO:0043813|GO:0046856
Aed4g0994 803 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 604 802 - -
Aed4g0994 803 MobiDBLite consensus disorder prediction 446 479 - -
Aed4g0994 803 MobiDBLite consensus disorder prediction 451 467 - -
Aed4g0994 803 Pfam SacI homology domain 97 392 IPR002013 GO:0016791
Aed4g0994 803 ProSiteProfiles Sac phosphatase domain profile. 161 557 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0994 Aed-Chr4 9127848 9138573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0994 22 803 Acyl Lipid Metabolism Gene Families AT3G43220 59.707 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0994 K22913 - gmx:100786438 1463.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0994 4 9127848 9138573 Aed4g0994 4 9127848 9138573 ECH
Aed6g2192 6 24176188 24185962 Aed4g0994 4 9127848 9138573 PCT