Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0992 ATGAAGCCACTGCTTGAGTTCCTCAGGCTTCACAGTTACAAGGGAAAGACTATGATGTTGAATGACAAAGTTCAAAACCTGGATTCTCTCCAACATGTTTTGAGAAAAGCAGAAGAGTATCTGACTTCAGTTGATCCTACAACTCCCTACTCGGAATTCGAACATACATTCCTGGAGATTGGTCTGGAGAGGGGGTGGGGTGACACCGCCGAGCGTGTCCTCGAGATGATCCAGCTTCTCCTGGATCTTCTTGAGGCACCCGACCCGTGCACCCTTGAGACATTCCTTGGAAGAGTCCCTATGGTCTTCAATGTTGTCATCCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTCTTGGGATACCCTGACACTGGTGGACAGGTTGTTTACATCTTGGATCAAGTTCGCGCCTTGGAGAATGAGATGCTCAACCGCATCAAGAAACAAGGCCTTGATATCACCCCTCGAATTCTCATTATCACTCGTCTTCTCCCCGATGCAGTAGGAACTACTTGCGGCCAACGTTTGGAGAGAGTATATGATACTGAATATTGCGACATTCTCCGAATTCCTTTCAGGACAGAAAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGATGTTGCAGTTGAACTTGCCAAGGAGTTGCAAGCCAAGCCAGATCTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCTTTGTTAGCACATAAATTAGGAGTAACTCAGTGTACCATTGCTCATGCTCTAGAAAAGACCAAGTACCCTGAGTCTGACATTTACTGGAAAAAGTTTGAAGAGAAATATCACTTCTCATGCCAATTCACTGCTGATCTTTTTGCTATGAACCACACAGACTTTATCATCACCAGCACCTTCCAAGAGATTGCAGGAAGCAAGGACACTGTTGGACAGTATGAGAGTCACACTGCATTCACCCTTCCAGGACTTTACCGTGTTGTTCACGGCATTGACCCCTTTGATCCAAAGTTCAACATTGTCTCTCCCGGTGCCGACATGAGCATATACTTCCCTTACACTGAAACTGAGCGTAGGTTAACAGAGTTCCACCCTGACATTGAAGAGCTTCTTTACAGCTCAGTGGAGAATGAGGAGCACATATGTGTGTTGAAGGACCGCAACAAGCCGATCATCTTCACCATGGCGAGGCTCGACCGTGTGAAGAACATCACAGGGCTAGTCGAGTGGTACGGGAAGAATGCCCGCCTCCGCGAGCTTGTGAACCTCGTGGTGGTGGCCGGAGACAGGAGGAAGGAGTCCAAGGACCTGGAGGAGAAGGCGGAGATGAAGAAGATGTACGGCCTCATCGAGACGTACAAGCTGAACGGCCAGTTCAGATGGATATCCTCCCAGATGAACAGGGTGAGGAATGGAGAGCTCTACCGTGTCATCTGTGACACAAAGGGTGCCTTTGTGCAGCCTGCAATCTATGAGGCCTTTGGCTTGACTGTGGTTGAGGCCATGACTTGTGGCTTGCCAACTTTTGCCACATGCAATGGTGGACCTGCTGAGATCATTGTGCATGGAAAATCTGGTTACCATATTGACCCTCACCATGGTGACCTTGCTGCTGACACCCTTGTTGAGTTCTTTGAGAAGAGCAAGGCTGATCCATCTCACTGGGACAAAATCTCCCAGGGAGGACTCCAGCGTTTGTCTTTTGAATCATTGGTCTGCAGGTACACATGGCAGATTTACTCTGACAGGCTCTTGACACTCACTGGTGTGTATGGCTTCTGGAAGCATGTGACCAACCTTGAACGCCGTGAGAGCAAACGTTACCTTGAGATGTTCTATGCCCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTATTGAAGAGTAA 1884 0.4804 MKPLLEFLRLHSYKGKTMMLNDKVQNLDSLQHVLRKAEEYLTSVDPTTPYSEFEHTFLEIGLERGWGDTAERVLEMIQLLLDLLEAPDPCTLETFLGRVPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLNRIKKQGLDITPRILIITRLLPDAVGTTCGQRLERVYDTEYCDILRIPFRTEKGIVRKWISRFEDVAVELAKELQAKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDPFDPKFNIVSPGADMSIYFPYTETERRLTEFHPDIEELLYSSVENEEHICVLKDRNKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGYHIDPHHGDLAADTLVEFFEKSKADPSHWDKISQGGLQRLSFESLVCRYTWQIYSDRLLTLTGVYGFWKHVTNLERRESKRYLEMFYALKYRKLAESVPLAIEE 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0992 627 Gene3D - 1 101 - -
Aed4g0992 627 PANTHER - 2 626 IPR012820 GO:0005985|GO:0016157
Aed4g0992 627 TIGRFAM sucr_synth: sucrose synthase 1 623 IPR012820 GO:0005985|GO:0016157
Aed4g0992 627 Gene3D Glycogen Phosphorylase B; 106 617 - -
Aed4g0992 627 Pfam Glycosyl transferases group 1 380 554 IPR001296 GO:0016757
Aed4g0992 627 Pfam Sucrose synthase 1 369 IPR000368 GO:0005985|GO:0016157
Aed4g0992 627 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 120 583 - -
Aed4g0992 627 Gene3D Glycogen Phosphorylase B; 343 574 - -
Aed4g0992 627 PANTHER SUCROSE SYNTHASE 2 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0992 Aed-Chr4 9082189 9089306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0992 1 627 Glycosyltransferase AT3G43190 83.046 0.0 1114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0992 K00695 - gmx:100819730 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0992 4 9082189 9089306 Aed4g0992 4 9082189 9089306 ECH
Aed6g2188 6 24151556 24156349 Aed4g0992 4 9082189 9089306 PCT