Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0989 ATGCATATCCCCTTGTCCATGACCATTGCTTACGTTAATTTGGCTTTGATCCCATTTCCCAACTACTCTCTTAGGCGCGGCAAGACCACATTGGCGTTGAAATCATGCGGAACCGGCGAGTTTGACTTGCCGGAAATTTTCGATGACTCCTCGCCGGAGACCGGAGGACACGCCTACGGCTCCATGCTGCCGGTGTTCCTCAACGACCTTCGGAGTAACCACCACAAGGAGCTCGTCGAGATCACGTTGGAGCTCGAACACGACGCGGTCGTGCTCTGCAACGTGGTGCCGGCGCCGTCCTCGGCTCCGAATGCTTCGCCGTCGTCGAGCGCCGTCGGATGTGACGGAAGCTCCGGCGTGGTGCGGAGCCTCTCTATCACGACGAGGATTCGAAGGAAGTTTCCGTGGCTGCGGTCGATGTCGTCCGCGTCGGTGGAGAGTGCCGCCGCCGCGGCCGCCGCCACCGTTGAGGATCCGGCGGTGACGGCGCGAAACGCGCGGAGAATGAGAGCGAAGCTCGAGAGGACGAGGTCGAGCGCGCAGAGAGCTTTGAAAGGTTTGAGGTTCATCAGCAAGTCCGGCGAGGCCTCGGCGGAGCTGTGGCGGAAGGTGGAAGAGAGGTTCAACGTGTTTGCCAAGGATGGCTTACTCGCTCGTGAAGACTTTGGTGAATGCATAGGAATGGAGGATTCGAAGGAATTTGCAGTGTGTATATTCGACGCATTGACACGAAGGAAGGAAAGGAGAGTGAGTAGCATAAACAGAGAAGAGTTGCATGAGTTCTGGTTGCAAATTTCAGACCAAAGTTTTGATGCTCGGCTTCAGATTTTCTTTGACATGGCAGACAGTAATGAAGACGGAAGAATTACAAGGGAGGAAGTACAAGAGGTAAGATTTTAA 900 0.5522 MHIPLSMTIAYVNLALIPFPNYSLRRGKTTLALKSCGTGEFDLPEIFDDSSPETGGHAYGSMLPVFLNDLRSNHHKELVEITLELEHDAVVLCNVVPAPSSAPNASPSSSAVGCDGSSGVVRSLSITTRIRRKFPWLRSMSSASVESAAAAAAATVEDPAVTARNARRMRAKLERTRSSAQRALKGLRFISKSGEASAELWRKVEERFNVFAKDGLLAREDFGECIGMEDSKEFAVCIFDALTRRKERRVSSINREELHEFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQEVRF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0989 299 Gene3D - 173 290 - -
Aed4g0989 299 PANTHER RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN E 66 297 - -
Aed4g0989 299 ProSitePatterns EF-hand calcium-binding domain. 282 294 IPR018247 -
Aed4g0989 299 ProSiteProfiles EF-hand calcium-binding domain profile. 269 299 IPR002048 GO:0005509
Aed4g0989 299 SUPERFAMILY EF-hand 187 297 IPR011992 -
Aed4g0989 299 PANTHER NADPH OXIDASE 66 297 - -
Aed4g0989 299 Coils Coil 163 183 - -
Aed4g0989 299 Pfam Respiratory burst NADPH oxidase 172 272 IPR013623 GO:0004601|GO:0050664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0989 Aed-Chr4 9057941 9061664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0989 50 297 Miscellaneous Gene Families AT1G19230 48.387 5.81e-68 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0989 K13447 - gmx:100805697 421.009