Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0956 ATGGCGCGGTTGTCGGCGGTGTGGTTCGCGGTGGCGGTGCTGTTGTGCGGCGCGGCGGCGGGTGCGTCGTCGTGGGTGGATGACGAGCTGAACCCGTTACGAATGGTGACGTCGGGTGTGGAGGCGGAGGTGGTTGCGGTGATAGGACAGTGCCGGCGCGCGCTGAAGTTCGCTAGGTTCGTGAGCAGGTTCGGGAAGAGTTACCGAAGCGAGGAAGAGATGAGGCAGAGGTATGAGATATTCTCGCAGAACTTGAGGTTCATCCGCTCCACTAACAAGAAGCGCTTGTCCTACACTCTCACTGTTAATCATTTTGCTGATTGGACTTGGGAGGAGTTCAAAACACACAGACTAGGCGCTGCCCAAAATTGCTCTGCCACTCACAAGGGCAACCACAAGCTTACCGATGCTGTTCCTCCTCTCGCGAGTGTCTCTCTTTCTGAGCAGCAGCTGGTGGATTGTGCTGGCCATTTCAACAACTATGGCTGCAGTGGTGGGTTGCCATCACAAGCCTTTGAGTACATTAAATACAATGGTGGACTCGAGACAGAGGAAGCATATCCCTACACTGGAAAAGATGGTGTCTGCAAATTCTCAGCTGAAAATGTTGCTGTTCAAGTCAAGGACTCTGTCAATATCACCTTGGGTGCTGAGGATGAATTAAAACATGCAGTTGCATTTGTTCGACCAGTTAGTGTGGCCTTTCAGGTGGTTACTAGTTTCCGATTCTATGAGAAAGGAGTTTACACTAGTGACATTTGCGGTAGCACTTCTCAGGATGTGAACCATGCCGTTCTTGCTGTTGGGTATGGAGTTGAAAATGGTGTCCCATATTGGCTCATTAAGAATTCTTGGGGAGGAAGCTGGGGTGACAATGGCTACTTCAAGATGGAATTGGGGAAGAACATGTGCGGTGTTGCAACTTGTGCATCTTATCCAGTCGTGGCATAA 951 0.5079 MARLSAVWFAVAVLLCGAAAGASSWVDDELNPLRMVTSGVEAEVVAVIGQCRRALKFARFVSRFGKSYRSEEEMRQRYEIFSQNLRFIRSTNKKRLSYTLTVNHFADWTWEEFKTHRLGAAQNCSATHKGNHKLTDAVPPLASVSLSEQQLVDCAGHFNNYGCSGGLPSQAFEYIKYNGGLETEEAYPYTGKDGVCKFSAENVAVQVKDSVNITLGAEDELKHAVAFVRPVSVAFQVVTSFRFYEKGVYTSDICGSTSQDVNHAVLAVGYGVENGVPYWLIKNSWGGSWGDNGYFKMELGKNMCGVATCASYPVVA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0956 316 Gene3D Cysteine proteinases 131 315 - -
Aed4g0956 316 CDD Peptidase_C1A 144 313 IPR039417 -
Aed4g0956 316 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 261 271 IPR025660 -
Aed4g0956 316 Gene3D - 50 121 - -
Aed4g0956 316 Pfam Cathepsin propeptide inhibitor domain (I29) 57 113 IPR013201 -
Aed4g0956 316 PANTHER THIOL PROTEASE ALEURAIN 25 140 - -
Aed4g0956 316 PANTHER THIOL PROTEASE ALEURAIN 143 313 - -
Aed4g0956 316 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 278 297 IPR025661 -
Aed4g0956 316 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 25 140 - -
Aed4g0956 316 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 143 313 - -
Aed4g0956 316 SUPERFAMILY Cysteine proteinases 53 314 IPR038765 -
Aed4g0956 316 Pfam Papain family cysteine protease 142 314 IPR000668 GO:0006508|GO:0008234
Aed4g0956 316 SMART Inhibitor_I29_2 57 113 IPR013201 -
Aed4g0956 316 SMART pept_c1 102 314 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0956 Aed-Chr4 8736640 8740485 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0956 K01366 - gmx:100170694 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0956 4 8736640 8740485 Aed4g0956 4 8736640 8740485 ECH