Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0954 ATGGTGGCCATGGCCAATAGAAGAATCGAAACATACGAAGAGTTCGCGAAAGTTCACGCGCTGCTCCTCGCGGCGTCGGGGCTGCCGGAGCGCCTTCACCGGCGCCTCTTCGAGAAGCTCTCTGGCGAGCGCTTCGACGGCGGCAACCACTTCCAGATCGAGCCGTGCGAGGAAGGTTGTCAGAGGCGCCTCGTCCTCACGTCGGAGTCGATGCCGCAGGACTCCGACGTCTTCCTCGTCGACCACGCCTGGACCTTCAGACTCTCCGACGCATACACGCAGCTGCGTGAGGTTCCGGGATTGGCTGAGAGGATGGGGTCTTTGATGTGCGTGGATGTTGATGATGTGAGTTCTGAAGCTGAAGCTGAAGTGAACGGTGAGCGTGGTGTTGTGGAAACTTTGGAGAGTGAAATTCGAGAGGCGAAGGAGAATGGAAATGGCGCGTTGAGGTGGTTGGAGCTTGAGGAGCTTCACATTGATGATGACATGCTTGTCTCTCTCGCCTTACCTATTAGGTTTCCGGAGTTAGTGGCACTTAGCCTGCTTGGAAACAAGCTCAATAGTGCTGAAGTGGTTGTTCAAGAACTTGTCAAATTTAAGCATCTTAAAGGAATCTGGCTCAACAATAACCCTGTTCTTAAAAATGGTGATGGTGAGCTTGCAGAGGTGATTCTTAAGGAGTTGCCAGAACTGGAAATTTATAATTCGAATTTCACGAGCAATTTTGGGGAGTGGGCCTTGGGCTTTTGTGCAGGGTTATATGGAAAGGATAACCCTGGAAATGCTGACCAGGCTGACTCTCCACTGCACACATTGTCTGCTCTTGACCTTTCAAATAGAAATATTCACAATTTAATCAAGAAGGCATTTTCACCCATTTGTTTGCCATCTCTTTCTTACTTGAACATTCGAGGAAATCCATTGGAGCAAAACTCTGTTGGTGACTTGTTAGATCTGCTGAGGAGATTCCCTTGCTTGCGTTCATTGGAGGTGGATATTCCTGGTCCACTTGGAGGAAGTGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAGTTAAATGGTATCAGTGAATCCAAAGTATTGGAAACTGGAAAGCAGGCTATGGCTTCAATGCTTATTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCTCTTGCTGACCGTATTATAAATGCAATGTGGCAATATCTAATGACATATAGACTTGCAGACGAAGAAAAGTTAGATGAAACATCTGTATGGTATGCAATGGATGAGCTAGGTTCCGCTTTGCGGCATAGTGATGAGGCAAATTTCAGAGTGGCACCATTTCTGTTTATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACACAGAAAGTTCAGAAAGGTGATGAGTGCACCCGCGATTTTCTTCTTGGTATTGGGGAGGCTAAACAACGTTCTGCCAGGCTTACAGCTTGGTTCCATACTCCAGAGAACTATTTTATCCAGGCATATGAGAAGCACCATCAGAAACTCTTGTCCACAAGTTCAATACCTCCCAGTCCCACCATTCAGTCTTCTGAGACTAGAAGTATTCATCAACCTGGTGAGCGTCTGTTATGTGTTTATACAGATATACCTCATGTAGAGGAATACTTGACACATCCCAAGTTTGCAATCACAAAGGAACCAAAAGATGCAGATATAATATGGACATGCGTGCAGGTAGATGAGGATATGAAGAAGGCCATGGGAATTACAGATCAGCAATACATTAATCAATTTCCTTTTGAGGCATGTCTTGTTATGAAGCATCATTTAGCAGAGACCATTCAGAAGGCACACAGATCTCCGCAATGGTTGCAGCCTACTTATAATCTTGAAACACACTTATCTCAACTTATTGGTGACTATTGTGTACGCAAAAAGGAAGGACTAGACAATCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACTATTGATACTACTGTAACTGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAGATTTGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCACCCTCTGGAGTTATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAACAACCAATATTCTTTGGACAGAAGTAGTTTGTTTGAATATGAAACTCATTTCACTGTTATGAATTACCGAGGAACAATAAATCATAAGAATGCAAATGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATGATTCGACAAGTGTTTGAGGCAGCCGCAGTTGCTCATCCTGAGATGCATAGTCCGATGGCACGGGCAATGTACGGTGTAGATGTCATGTTGGACAGCTCTTTTCAACCTAAGTTACTCGAGGTGACTTATTGCCCGGATTGTACAAGAGCCTGCACACATGACATGGATATTGTGGTTGGAGAGGGAGGCGTTGCCAAAGCTACTGATTTCTTCAACAATGTGTTCAGCTGTCTCTTTTTGAATGAAATTTCACAGGTTAGCCCATTGTAA 2604 0.4474 MVAMANRRIETYEEFAKVHALLLAASGLPERLHRRLFEKLSGERFDGGNHFQIEPCEEGCQRRLVLTSESMPQDSDVFLVDHAWTFRLSDAYTQLREVPGLAERMGSLMCVDVDDVSSEAEAEVNGERGVVETLESEIREAKENGNGALRWLELEELHIDDDMLVSLALPIRFPELVALSLLGNKLNSAEVVVQELVKFKHLKGIWLNNNPVLKNGDGELAEVILKELPELEIYNSNFTSNFGEWALGFCAGLYGKDNPGNADQADSPLHTLSALDLSNRNIHNLIKKAFSPICLPSLSYLNIRGNPLEQNSVGDLLDLLRRFPCLRSLEVDIPGPLGGSAIEILESLPNISELNGISESKVLETGKQAMASMLIPRLPEWTPDEPLADRIINAMWQYLMTYRLADEEKLDETSVWYAMDELGSALRHSDEANFRVAPFLFMPEGNLASAVSFSILWPTQKVQKGDECTRDFLLGIGEAKQRSARLTAWFHTPENYFIQAYEKHHQKLLSTSSIPPSPTIQSSETRSIHQPGERLLCVYTDIPHVEEYLTHPKFAITKEPKDADIIWTCVQVDEDMKKAMGITDQQYINQFPFEACLVMKHHLAETIQKAHRSPQWLQPTYNLETHLSQLIGDYCVRKKEGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLELFLSDCFWVRIANNQYSLDRSSLFEYETHFTVMNYRGTINHKNANDFVREFEEEHQVKWLDIHTRVRKMIRQVFEAAAVAHPEMHSPMARAMYGVDVMLDSSFQPKLLEVTYCPDCTRACTHDMDIVVGEGGVAKATDFFNNVFSCLFLNEISQVSPL 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0954 867 Gene3D Ribonuclease Inhibitor 264 382 IPR032675 -
Aed4g0954 867 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 5 866 IPR027749 -
Aed4g0954 867 Pfam Tubulin-tyrosine ligase family 585 835 IPR004344 GO:0036211
Aed4g0954 867 Coils Coil 124 144 - -
Aed4g0954 867 ProSiteProfiles TTL domain profile. 531 861 IPR004344 GO:0036211
Aed4g0954 867 Gene3D - 661 850 - -
Aed4g0954 867 SUPERFAMILY RNI-like 149 355 - -
Aed4g0954 867 Gene3D Ribonuclease Inhibitor 112 241 IPR032675 -
Aed4g0954 867 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 644 824 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0954 K16609 - gmx:100809212 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0954 4 8725140 8731257 Aed4g0954 4 8725140 8731257 ECH