Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0947 ATGGCTAGAGTGACAAAGGAGGAAGAAGAGATGGGTAGTCCTCGTTGGGGTTCTTCATTTATTACACAGACAACAGAGGATGTGGCTAGAGCTGTTGCTGCTGCTATGAATACTCCAAGGCCATCTGTGATATATCCACCGAAAAATGATCACGGTGGCAGCCAACTTCAAAGACTGCAGTATCAAGTTACGAAAATGATAAAAGGATTTTCTCGTCCTCCAGAAGTTAAATATGCAAATTACAATCCTGAAATTTTGACAACTCAGAAGCGTCAATGGGCTGCAAACTTTCAGTTACAGTACATGGACCATAAGTCTTGGAAGGAGCCGACAAGGCTGTTTGAAAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATATTCAGGCACTGCAAAGTCAATATTTGTTAAGAAAGTCTGAAGGCCCTGGTAAATTGAGAAGTGCGCTTGGTTATCAGAATCAATCCCGTGTGGAAGCAGAACCCAATCTAGAACCTCAGGTTTTATTTGTTTACCCTCCAGAAAAACAGATGCCTCTTAAAGACAAGGATCTTCTCTCTTTCTGCTTCCCTGGAGGCTTGGAGGTTAATGCTGTTGAGAGAACCCCTTCCATGAGTGAGTTGAATGAAATTCTATTTGGGCAGGAACACCTTAAACAAAGGGATCTGTCTTTTGTATTTAGGCTACAGGGTGCTGATAATTCAACACTTTATGGGTGCTGTGTCTTAGTTGAAGAGTTAGTGCAAAAACCCTCCGGATTCCTCTCCCTGACTTGTGATAAGCAGTCAACTTATTCTTCTTTGAAACGCCATCGTCATATATTAACCACAAAGAGATGTTACTGCATTCTCTCAAGGCTCCCATTTTTTGAATTGCACTTTGGTGTATTGAATAGCATCTTCATGCAAGAACGGCTAGAGCGGTTGACGAGAAGTGTTGGAGATTTAAATTTTGAATATATTGAAGGTAGCTGTGAGGAAGAAAATTTGGAGGAAAAATCAGAGTGCATGTCGGTGAATGATAGATTAGAAGATATACACGATGACAATCCAAGGATTTCTCAATCAGGCCTAAGAAATTCCTCATCTGAAAACATTGAAGATGAGAGTCATTATCCCGAGAAACAAATGGCTAATGGGGAGCTGCATACATTTAAGGAGAGAGTCAATGATGACAAGGCTGTGCCTAGTGATCCTGAAACTAATATAAAAACTGTCAAGGAAGAATCTGGCCCTACAAATGCTGAAGATAGTGATTTGTATGGAGATGCTCTTGTAACAAACAAACAGTCAGAAAATAGGCGTTTACCAAATGCCATTTTACCACTTCTGCGCTATTCCCAGTATGAAAGCTCTGAATCTTCTTGCAGTTTTCAGGGTTCTCCTTGTGATGACAGGAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCATTCTCTGGCCAAGAAGATTTAAATGACCTACATGGTATTCTTGAATGGGCGAAGGCAAATAACTGTGGACCCTTACAGATTATAAGTGAGTATTATCGCTTAGGATGCCCTGCAAGGGGCTCAGCTCTTAGGTTTCATCCTTTGGAGCACCTGCATCCCTTAGAATATCACAGACCAGATGAGACAATTCTACGTCTTGCCGGTTCAACTGTTGACTTGAAATCTTGCAGTACGGGTCTGGAATTCGCAGAGGTGTTAACATTCTTTGCAGGAGCTCTACTGGAGAAGCAGATTGTTTTTGTCTGTTCTAATTTGGGAATCCTATCTGCTTCAGTTTTATCAGCCATTCCACTAATCCGGCCCTACCAATGGCAAAGCTTGCTTATGCCGGTTTTACCAAATGGCATGCTCGAGTTTCTGGATGCACCTGTCCCCTACATAGTTGGTATCAAGAACAAGACCAATGAAGTTCAGTCAAAGTTAACTAATAATGTTATCCTGATTGACGCCAACAGAAACCAGGTGAAGTCATCAACAATACCTCAACTGCCAAGGCAGAAAGAGTTAATCTCTTCTTTACGTCCTTATCATGAAACTCTTGTGGGAGAAAGTTACTTGGGTAGGAAAAGGCCAGTGTATGAATGCACGGAATTGCAGACAGAAGCTGCCAAGGGGTTCTTATCGGTGTTAAGGTCTTATTTGGATTCCCTTTGCTGTAACATTCGTTCTCATACAATAACCAATGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAAGGAGAGTTTCATTGACTCGTTTCCTTATCGTGATCGGCCTTTCATGAAGGTTTGGCTCATGAACTTTACATCATGA 2301 0.415 MARVTKEEEEMGSPRWGSSFITQTTEDVARAVAAAMNTPRPSVIYPPKNDHGGSQLQRLQYQVTKMIKGFSRPPEVKYANYNPEILTTQKRQWAANFQLQYMDHKSWKEPTRLFESMVVVGLHPNCDIQALQSQYLLRKSEGPGKLRSALGYQNQSRVEAEPNLEPQVLFVYPPEKQMPLKDKDLLSFCFPGGLEVNAVERTPSMSELNEILFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEELVQKPSGFLSLTCDKQSTYSSLKRHRHILTTKRCYCILSRLPFFELHFGVLNSIFMQERLERLTRSVGDLNFEYIEGSCEEENLEEKSECMSVNDRLEDIHDDNPRISQSGLRNSSSENIEDESHYPEKQMANGELHTFKERVNDDKAVPSDPETNIKTVKEESGPTNAEDSDLYGDALVTNKQSENRRLPNAILPLLRYSQYESSESSCSFQGSPCDDRNFRSDADDTETEDASFSGQEDLNDLHGILEWAKANNCGPLQIISEYYRLGCPARGSALRFHPLEHLHPLEYHRPDETILRLAGSTVDLKSCSTGLEFAEVLTFFAGALLEKQIVFVCSNLGILSASVLSAIPLIRPYQWQSLLMPVLPNGMLEFLDAPVPYIVGIKNKTNEVQSKLTNNVILIDANRNQVKSSTIPQLPRQKELISSLRPYHETLVGESYLGRKRPVYECTELQTEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRPFMKVWLMNFTS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0947 766 MobiDBLite consensus disorder prediction 1 20 - -
Aed4g0947 766 MobiDBLite consensus disorder prediction 346 375 - -
Aed4g0947 766 Gene3D - 101 313 - -
Aed4g0947 766 MobiDBLite consensus disorder prediction 390 414 - -
Aed4g0947 766 MobiDBLite consensus disorder prediction 390 419 - -
Aed4g0947 766 MobiDBLite consensus disorder prediction 453 484 - -
Aed4g0947 766 ProSiteProfiles Tripartite DENN domain profile. 149 766 IPR037516 -
Aed4g0947 766 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 565 - -
Aed4g0947 766 PANTHER DENN (AEX-3) DOMAIN PROTEIN 563 760 - -
Aed4g0947 766 SMART uDENN_cls 110 245 IPR005113 -
Aed4g0947 766 Pfam uDENN domain 166 243 IPR005113 -
Aed4g0947 766 Pfam DENN (AEX-3) domain 510 652 IPR001194 -
Aed4g0947 766 Gene3D - 550 716 IPR043153 -
Aed4g0947 766 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 565 - -
Aed4g0947 766 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 563 760 - -
Aed4g0947 766 SMART DENN_cls 276 654 IPR001194 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0947 Aed-Chr4 8663561 8676698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0947 - - gmx:100782148 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0947 4 8663561 8676698 Aed4g0947 4 8663561 8676698 ECH
Aed6g2146 6 23849920 23859779 Aed4g0947 4 8663561 8676698 PCT