Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0935 ATGAGTTTCATCTTCGGAAAGCGAAAAACACCCGCAGAGCTTCTGCGGGAAAATAAGAGGATGCTGGACAAGTCAATCAGAGAAATTGAGCGCGAGCGGCAAGCTTTGCAAACGCAGGAGAAGAAATTGATTGCGGAGATAAAGAAAAGTGCCAAACAGGGCCAGATGGGAGCTGTTAGAGTTATGGCAAAAGATCTAGTTAGAACAAGGCATCAAGTTGAGAAGTTTTATAAGCTGAAATCTCAGCTCCAAGGTGTATCACTCAGAATTCAGACTTTGAAATCAACACAAGCAATGGGTGAGGCTATGAAAGGCGTGACAAAGGCCATGGGGCAAATGAATAGGCAGATGAACTTGCCATCTTTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAAAAGATGGAACTGACATCTGAGGTGATGGGAGATGCAATAGATGATGCTTTGGAAGGAGAAGAAGATGAAGAGGAAACTGAAGATCTAGTACCTCAAGTTGAAGCTACTGGAAATGAAGATGGCGGCGGGATAGATAGCGATTTGCAGGCAAGACTCCAGTTTTCCTGGGAAAATTAA 579 0.4335 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQALQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTSEVMGDAIDDALEGEEDEEETEDLVPQVEATGNEDGGGIDSDLQARLQFSWEN 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0935 192 Gene3D - 6 174 - -
Aed4g0935 192 MobiDBLite consensus disorder prediction 148 180 - -
Aed4g0935 192 MobiDBLite consensus disorder prediction 148 164 - -
Aed4g0935 192 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 167 - -
Aed4g0935 192 Coils Coil 12 53 - -
Aed4g0935 192 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 167 IPR005024 GO:0007034
Aed4g0935 192 Coils Coil 119 139 - -
Aed4g0935 192 Pfam Snf7 17 170 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0935 Aed-Chr4 8553062 8556716 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0935 K12191 - gmx:100791887 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0935 4 8553062 8556716 Aed4g0935 4 8553062 8556716 ECH
Aed6g2137 6 23800048 23801893 Aed4g0935 4 8553062 8556716 PCT