Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0928 ATGATGTTGTCGAGAATGGAGTCTGGGAAAAAGGGCGGTGTTGGTTCTAGTAACCAGAAGAAATTGTTAAAGGATGTAGAAACCATAAACAAATCTTTGTACTTGGATAGAAGCACTTCAAGGAGTTCAATACCTAGTGCAAATTCTAGATCTAAATTCACAGGGAAACCTCAGTTGCCTGATCCCAAATCAAAGTCTAAAGCTAGTGTTGAAAATAACAATGATGATAGAGTTCAGAAGGATAATAAGAGGTCCATATGGAATTGGAGGCCATTAAGGGCCCTTTCGCATATCCGAAATAAGAGGTTCAATTGTAGTTTTTATCTCCAAGTTCATTTGATTGAAGGGTTGCCTCCGAGTTTCGATGATGCTAGCCTTGCTGTGTACTGGAAGAGGCGCGACGGGGTTCTCGTGACTCAGCCGGCCAAGGTGGTTCAGTGTGTGGCTGAATTTGAGGAGAAGCTGTCCTACACTTGCTCGGTGTATGGCAGCAGGAGTGGACCTCACCATTCCGCGAAGTATGAAGCAAAGCATTTTTTGCTATATGCTTCGCTTCTCAGTGCGCCGGAGATGGATTTGGGGAAGCACCGGGTGGATCTGACGAGGCTGCTTCCTCTCACTCTGGAGGAGCTCGAGGAGGAGAAGAGCTCAGGGAAGTGGAGTACCAGTTTTCGATTATCGGGAGTGGCTAAGGGTTCTGTGATGAATGTCAGTTTTGGGTATACAGTGGTTGGTGATAATGCTAGTGCTACTGCGACTAGAGATAGCCATAATAATACTCCTAATAAAGCCTTGACCTCCAGGCAGAATAGTTTTACTCCGACAAAGCTAGATGTTAAACCAAGACAGTTTGATGGAAGCAGCAGGATGAGTCGTGCGACAAGTTTGCAATACTCACCTCAAGCTTCAGATGAGGTAAAGGATCTTCATGAGGTAGTGCCATTAACTAAGTCAGTTCTAGCCAGCTCAATAGACATCTTATATAAGAAATTGGATGAAGAAAAGGCATGTAGTCCTCTGGATGATGAGGCAGAACTTGATTCCTTCACAGAAAATCTTGGGCCAATCAAATCAGATGCCTATGCTTCTGATCTTGGGAAAGAAAGGCTTGAAGAGCATGCGAGTAAGGATGAAAATGCATGTCCAGTGCATGACAAACCTGAACTCTATGTATTTCAAGAGAAGCCAGAGACAGTTGAACCAGATGGCTATCCTTTACCAGATTCTGGAAACGAAAACCCTGAACAGTGTCATGAGAATGAATTTTTTGTTGTTGATAAGGGCATAGAACTTTCATCAAACGAACCTGTTAAACTAGAGGAATCTGTCATAAAGGCTCCTGATGATGCTTCTACAGTTGATACTGCCTGTACCCTTGGTATATCAGGTATACAAATATCTTCTGAATATAGTGTTACACACGATTTTCTTGATGAGGCAAATGATAGTTCTAAGGATCGAGCAGTGGTAGAGGAATTTGCTAGCATAAAGGCTCCTGAGGATGCTTCTACAATTGATACTGCCTTTACTCTTGGTATATCAGGTATACAAGTATCTTCTGAAGATAGTGTGAAACATGATTTTCTGGATGAGGAAAATGGCTTTGACACTAATGAGCTGCTCTTGCAAGAACTAGAATCTGCTTTAAACAGTGTCTCGAATTTGGAGAGAGTGGCACTAGAATCTCCTAAAACTTCAGAAGTGAAATTGGAACATAAAATGACAAAGTCACATAGCTTGGATGATGTTACAGCATCTGTTGCCACTGAATTTTTAAGCATGTATGGCTTAGACCATAGTCCAATTGGCTTGAGTTCTGAAAGCGAGCCTGAGTCTCCAAGAGAGCTACTTTTAAGACAATTTGAGAAGGAGGCTCTGAATGGGGGCTTCTCTTCTTTGTTTGATTTTGACATGAACTATGATAATGAAGCAGATGATGGCTATGATGCTTCTGCTGTTTCTGAGCAATGGAATTTTTCTGAAGGTGTCAAGTCATCATCCTTCTTGCAAGATTTGCCGGAGGAGCATCTAGTTGAGTCTCAGGATGTGAGGAGCAAACAGAGGGCTCAAATACTAGAAGACTTGGAAACAGAAGCCTTGATGCGTGAATGGGGTTTGAATGAGGAGGCTTTTCATCATTCTCCACCAAAAGATTTTGCTGGTTTTGGAAGTCCAATTCAATTACCACCTGAAGAGCCTCCCACATTGCCTCCTCTTGATAGTGGGTTGGGCCCTTTTCTTCAGACAAAAGACGGGGGTTTTCTGCGGTCTATGAATCCTTCAATTTTCAAGAATTCTAAAAGTGGTGGGAGCTTAATCATGCAGGTATCCAACCCTGTTGTGGTACCTGCAGAAATGGGGTCTGGGATAATGGAGGTTTTGCAGTGCTTAGCTTCTGTGGGAATTGAAAAACTCTCAATGCAGGCAAAGGAGTTAATGCCGCTGGAAGATGTCACTGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTTCCTTAGAGGGTGCAGAGAGTCAATGTCATTTGCAGCATGATCCAATTACAGGACCAGACAGTGCTTATGTGCAAAGGGACTTGAAAGGAATGCCATCTAAACAAAAGTCTGGCAAATATAGTTCAAGAACAGTGGCCAACCAAGCAGGCTCAGAGTTTGTTTCATTAGAAGACCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATCCAATCTGGGATGTCAGAAGAGGAAGCCCCGTCAAACATCGTTGCTCAGTCCATTGGAGATATTTCAGCTCTCCAGGGCAAGGGAGTTGATATTAGTGGGTCCCTTGGCCTGGATGGAGCTGCTGGTTTGCAGTTGATGGATGTAAAAGACGGTGGTGACAATAGTGACGGTGTTGATGGCATAATGAGCCTATCATTAACTCTTGATGAATGGATGAGGCTGGATTCAGGTGAGATTGATGATATTGATAATATCAGTGAGCACACTTCCAAACTTCTTGCAGCCCATCATGCCAACTCTTTTGACTTCATTCGTGGGAGTTCGAAGGGAGAGAAGAGACGAGGCAAAAGTAGAAGATGTGGTTTGCTAGGAAACAATTTCACAGTAGCGTTAATGGTGCAACTCCGTGATCCGCTGAGAAACTACGAGCCAGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGAGTTCATGCTTCCAAAGCAAAGAATTTTCAACAGTGTGTCTGAGATAAGGAAAAACTATGATCAGGATGACCAGAGGGAAATAGTAGCGAAGGTGGAGACGAAGGACAACGAGAAAGAGGAGAAAAGTTCCGAAGAGGAAGAGGGCATTCCTCAGTTCCGAATCACTGAAGTCCATGTGGCAGGTCTGAAGCCCGAGCCTCAGAAAAAGAAGCTTTGGGGCACTTCAAGCCAGCAACAGTCCGGATCTCGCTGGTTGCTTGCTAGTGGAATGGGGAAGGGCAATAATAAACTTTCACTAATGAAGTCAAAGGCTGCATCAAAATCTAATGCTCCAGTTACCACCACAAAGGTGCAAACTGGTGGTGACAGCTTGTGGAGCATATCATCTCGTATTGATGGTGCCCGAGGAAAATGGAAGGAGTTGGCTGCTCTAAATCCACATACAAGAAACCCCAATGTCATTTTACCAAATTCCAAATGA 3681 0.4358 MMLSRMESGKKGGVGSSNQKKLLKDVETINKSLYLDRSTSRSSIPSANSRSKFTGKPQLPDPKSKSKASVENNNDDRVQKDNKRSIWNWRPLRALSHIRNKRFNCSFYLQVHLIEGLPPSFDDASLAVYWKRRDGVLVTQPAKVVQCVAEFEEKLSYTCSVYGSRSGPHHSAKYEAKHFLLYASLLSAPEMDLGKHRVDLTRLLPLTLEELEEEKSSGKWSTSFRLSGVAKGSVMNVSFGYTVVGDNASATATRDSHNNTPNKALTSRQNSFTPTKLDVKPRQFDGSSRMSRATSLQYSPQASDEVKDLHEVVPLTKSVLASSIDILYKKLDEEKACSPLDDEAELDSFTENLGPIKSDAYASDLGKERLEEHASKDENACPVHDKPELYVFQEKPETVEPDGYPLPDSGNENPEQCHENEFFVVDKGIELSSNEPVKLEESVIKAPDDASTVDTACTLGISGIQISSEYSVTHDFLDEANDSSKDRAVVEEFASIKAPEDASTIDTAFTLGISGIQVSSEDSVKHDFLDEENGFDTNELLLQELESALNSVSNLERVALESPKTSEVKLEHKMTKSHSLDDVTASVATEFLSMYGLDHSPIGLSSESEPESPRELLLRQFEKEALNGGFSSLFDFDMNYDNEADDGYDASAVSEQWNFSEGVKSSSFLQDLPEEHLVESQDVRSKQRAQILEDLETEALMREWGLNEEAFHHSPPKDFAGFGSPIQLPPEEPPTLPPLDSGLGPFLQTKDGGFLRSMNPSIFKNSKSGGSLIMQVSNPVVVPAEMGSGIMEVLQCLASVGIEKLSMQAKELMPLEDVTGKTMQQIAWEAMPSLEGAESQCHLQHDPITGPDSAYVQRDLKGMPSKQKSGKYSSRTVANQAGSEFVSLEDLAPLAMDKIEALSMEGLRIQSGMSEEEAPSNIVAQSIGDISALQGKGVDISGSLGLDGAAGLQLMDVKDGGDNSDGVDGIMSLSLTLDEWMRLDSGEIDDIDNISEHTSKLLAAHHANSFDFIRGSSKGEKRRGKSRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQRIFNSVSEIRKNYDQDDQREIVAKVETKDNEKEEKSSEEEEGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQQSGSRWLLASGMGKGNNKLSLMKSKAASKSNAPVTTTKVQTGGDSLWSISSRIDGARGKWKELAALNPHTRNPNVILPNSK 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0928 1226 MobiDBLite consensus disorder prediction 1098 1117 - -
Aed4g0928 1226 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1225 IPR039614 -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 37 79 - -
Aed4g0928 1226 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 2 1225 - -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 1168 1188 - -
Aed4g0928 1226 Gene3D LysM domain 1171 1226 IPR036779 -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 251 299 - -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 37 55 - -
Aed4g0928 1226 ProSiteProfiles LysM domain profile. 1180 1226 IPR018392 -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 251 277 - -
Aed4g0928 1226 Coils Coil 538 558 - -
Aed4g0928 1226 CDD LysM 1183 1223 IPR018392 -
Aed4g0928 1226 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 100 245 IPR019448 -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 1137 1152 - -
Aed4g0928 1226 ProSiteProfiles C2 NT-type domain profile. 95 243 IPR019448 -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 1 22 - -
Aed4g0928 1226 MobiDBLite consensus disorder prediction 1130 1155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0928 Aed-Chr4 8469019 8473838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0928 - - gmx:100815106 2061.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0928 4 8469019 8473838 Aed4g0928 4 8469019 8473838 ECH
Aed6g2131 6 23749312 23752782 Aed4g0928 4 8469019 8473838 PCT