Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0919 ATGGAGTGCGTTGCAGCGAGGAATTTGGCGGCAATGGCGTTTTGCGTGAGTCCTTCGTCGACGCGGTTGAGGCTGCGGAGGAAGAAGCTGTGGAGAAGACGAACCGCGCCGCCTTCGTGCGGCGGCCGCGGCGTGCGGTGGCTGAAGGTGGAGGCGAAGGCGGGGAGAGAGAGCTGCGTGGCGACAAAAGAGGACTTCGCCGATGAGGAGGATTACGTCAAGGCCGGTGGCTCCGAACTCGTTTTCGTCGAAATGCAACAGAACAAAGCTATGGAAATGCAATCCAAGCTCGCGGATAAGTTGCCACCTATAGGAGATGATATATTGGATTTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTGGCAGCTGAATCAGCCAAGTTAGGACTAAAAGTTGGTCTTATTGGTCCAGATCTCCCTTTTACAAATAACTATGGTGTGTGGGAGGACGAATTTAAAGATCTCGGACTTGAAGGTTGCATTGAGCATGTTTGGAAGGATACCATTGTCTATCTCGACAATAAGGACCCCATTTTTATTGGACGTTCGTATGGACGTGTCAGTCGGCATCTGCTTCATGAGGAATTGTTAAGAAGGTGTATCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAGAGTATTGTTGAGGCGAGCAATGGTCATAGTCATGTTGTCTGTGAATATGATATTGTAGTGCCCAGCAGGCTTGTTTCTGTTGCATCAGGAGCTGCTTCAGGGAAACTGTTGCAATATGAGGTCGGGGGTCCAAAAGTGTCTGTCCAAACAGCTTATGGTTTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACGTGAAGCAAAATGTTCAATGTCCAGAAGCAAATTATCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTAGCGTCCAAAGATGCCATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCGAGATTAAATACAATGGGGATCAGAATTACGAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGCGGATCCTTACCGAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGCATGACTTCATCACATTTTCATTTAATGGATATGCTTAATTTAATTTATTGCCATTCAATATCAGTTTTTACTTTTTATCCAATAGGGTACTCCGTTGTGAGATCTTTGTCAGAAGCTCCAAAATATGCTTCAGTAATTGCTACAATTTTGAAAGATGGTCATGCCAAGGACATTGTTACTCAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGGCAGAGAGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCAGCTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGAGTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTCTCATCTACAGATCTTGTACTATTTGCATTCTACATGTTCATAATAGCCCCAAATAACTTGAGAATAGGCCTAGTCAGACATCTGCTTTCGGATCCTACTGGTGCAACTATGATAAAGACTTACTTAGCGATATAG 1680 0.444 MECVAARNLAAMAFCVSPSSTRLRLRRKKLWRRRTAPPSCGGRGVRWLKVEAKAGRESCVATKEDFADEEDYVKAGGSELVFVEMQQNKAMEMQSKLADKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCIESGVSYLSSRVESIVEASNGHSHVVCEYDIVVPSRLVSVASGAASGKLLQYEVGGPKVSVQTAYGLEVEVENNPYDPNLMVFMDYRDYVKQNVQCPEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRITKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGMTSSHFHLMDMLNLIYCHSISVFTFYPIGYSVVRSLSEAPKYASVIATILKDGHAKDIVTQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFCLPEWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRIGLVRHLLSDPTGATMIKTYLAI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0919 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 240 249 - -
Aed4g0919 559 PRINTS Pyridine nucleotide disulphide reductase class-I signature 110 132 - -
Aed4g0919 559 SUPERFAMILY FAD/NAD(P)-binding domain 108 532 IPR036188 -
Aed4g0919 559 Pfam Lycopene cyclase protein 418 536 - -
Aed4g0919 559 Pfam Lycopene cyclase protein 110 391 - -
Aed4g0919 559 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 418 518 - -
Aed4g0919 559 PANTHER LYCOPENE EPSILON CYCLASE, CHLOROPLASTIC ISOFORM X1 7 392 - -
Aed4g0919 559 TIGRFAM carotene-cycl: lycopene cyclase family protein 110 390 IPR010108 GO:0016117|GO:0016705
Aed4g0919 559 Gene3D - 109 391 IPR036188 -
Aed4g0919 559 PANTHER - 418 518 - -
Aed4g0919 559 PANTHER - 7 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0919 Aed-Chr4 8362251 8371279 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0919 K06444 - gmx:100788180 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0919 4 8362251 8371279 Aed4g0919 4 8362251 8371279 ECH