Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0887 ATGGCTGCTGCATCATCATCTGCGAGACTCGCGGTAACAGCGTTTCTTCTGATAGCTTTGGCAACAATCTCTCTCCAATCTTCAGCTTCAGCTTCTTCGGTCGGTAAATTCGTCGACGACACCATCACTTCCCACAAGATCGTCATTTTCTCCAAAACCTATTGCCCGTACTGTAGAAGAGCAAAAGATTTATTCAAAAACTTGAACCAAGTTCCCCATGTTGTTGAGCTCGATGAGAGAGAGGATGGTTCACAGATTCAGGATATCTTGATCAATATTGTTGGGAGGCGTACTGTGCCACAAGTCTTCATTAATGGAAAACACATTGGAGGCTCGGATGACGTCCATGATGCTTTGGGGAGTGGACGTCTGCATAGACTTCTAGGAATCGAGAAAACGGAGGACGACAACGATCGCTATGATCTCTGA 429 0.4569 MAAASSSARLAVTAFLLIALATISLQSSASASSVGKFVDDTITSHKIVIFSKTYCPYCRRAKDLFKNLNQVPHVVELDEREDGSQIQDILINIVGRRTVPQVFINGKHIGGSDDVHDALGSGRLHRLLGIEKTEDDNDRYDL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0887 142 Pfam Glutaredoxin 47 109 IPR002109 -
Aed4g0887 142 PANTHER BNAA02G04900D PROTEIN 12 125 - -
Aed4g0887 142 Gene3D Glutaredoxin 25 129 - -
Aed4g0887 142 SUPERFAMILY Thioredoxin-like 36 128 IPR036249 -
Aed4g0887 142 PANTHER GLUTAREDOXIN 2 12 125 - -
Aed4g0887 142 ProSiteProfiles Glutaredoxin domain profile. 35 135 - -
Aed4g0887 142 PRINTS Glutaredoxin signature 47 65 IPR014025 -
Aed4g0887 142 PRINTS Glutaredoxin signature 92 105 IPR014025 -
Aed4g0887 142 PRINTS Glutaredoxin signature 106 119 IPR014025 -
Aed4g0887 142 ProSitePatterns Glutaredoxin active site. 49 64 IPR011767 -
Aed4g0887 142 CDD GRX_GRXh_1_2_like 46 127 - -
Aed4g0887 142 TIGRFAM GRX_euk: glutaredoxin 47 127 IPR011899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0887 Aed-Chr4 8042515 8045594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0887 38 115 Miscellaneous Gene Families AT4G15700 37.179 3.04e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0887 K03676 - gmx:100777703 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0887 4 8042515 8045594 Aed4g0887 4 8042515 8045594 ECH