Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0835 ATGGGATGTTCACATTCAAGGTTGGATGATGAAGAGGCAGTTCGGCTTTGTAAAGACAGAAAGAAGTTCATCAAGCAAGCTGTTGAACAAAGAACTCGATTTGCCACTGGACACATAGCATACATAGAATCTCTGAAAAGGGTTTCAGCAGCACTTCGCGATTACATTGAAGGTGATGAGCCTCGTGAGTTCTCATTAGACACAGTCATCACCCCGCCTTTCACACCTGTGAAGAAGAAAACTGGTCCAGGATTCATTCCCTTATCAGCAAAACCCTTTGCTACAACAGGAGCAATTGAGTTTGGGATTGGACCAAACTCTACTTTGAAAGTGAATTACCTTAGGCCTGGTGGTAACCCAGCAATTTCAGTTGAGGAAAGGCCACAATCCCCAGAAAGGGTTCGGGTTGAGACGTATTATTCTCCAATGCAGCACTATGGCATTGATGGATTTTTCAACATGCAATCCTCACCTGCAAATCCCTCGATTTTTGCTTACTCTCCCAATAATAGGCCTAATATCCCTCCCCCTTCACCTCAAGCTTCCCAATGGGATTTCTTTTGGAACCCCTTTTCATCATTGGACAGTTATGGTTATCCTTCAAGAAGTAGCCTTGACCAAACTGCAATGGATGATGAATACAGAGGACTTAGACAGGTTAGAGAAGAAGAGGGAATACCAGATCTGGAAGAAGATGAAAATGAACATGAAGATTGTATTGGAAAGAGAAATGTAGCAGAAGAAAGAACTAGACACAATGTAAATTCTTCCAAAGAAGATGTTATTGTTGAAGATGTAGATGATGATGATGATGATGATGATGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGATGAGGATGAGGAAGAGGAGGTAGAAACAGACATTGAAGATGAAACTGCAACTGAGCATGATGCCAAAGATTCACAAGCTCATGGTAGTGCAAGTTTTAAAGTATCAAAAGCTCAAGCTGCTGGTCATATTAAATCCAGACATAGGGAAATGACAATTGGTAAGCAAGAAGCTATGGAAGAAACACCAGGTTTTACTGTTTATGTAAACCGAAGGCCAACAAGCATGGCAGAAGTGATCAATGATCTTGAAACTCAATTCACAATCGTCTGCAATGCAGCCAATGATGTTGGGGCATTACTAGAGGCCAAGAAATCTCAGTATTTATTGACATCTAGTGAACTTTCAGCATCTAAGTATTTGAGCCCGGTAGCTCTGCTCCGATCAGCTTCTTCACACTCTTCTTCATCAAGATTTTTGGTGAATTGTTCAAGCACTGGCAAGGAAGGTTGTGAGGGCACTAAGGATATCTCAAATGAACATTGTATGTTATCTGGTAGTCACCACACCACATTGGACAGATTAGATACATGGGAGAAGAAGCTCTATGAGGAAGTCAGGTGTGGAGAACGTGTTCGAATTGCATACGAGAAGAAATGCAAGCAACTCAGGAACCTTGATGTAAAAGGAGAGGACCCCTCTTGTGTAGATAAAACAAGAGCAGCCATCAGAGAACTAGATACCCAGATAACGGTTTCAATACACTCAGTTGAAGCTATTTCGAGGAGAATCGAAACTCTAAGGGATGAAGAGTTGCATCCACAACTTCTTGAATTAGTGCAAGGGCTGGAAAGGATGTGGACAGTGATGGCAGAATGCCATCAGATACAGAAGAGAACCTTAGATGAGGCTAAGATTCTTCTAGCTGGCACTCCTTCTAAATCACATGCCAGAAAACAATCTTCCATGTCAATGACTGATCCAACCAGGCTGGCGCGCTCGGCCTCCAATCTTGAATTCGAGTTAAGGAACTGGAGAAACGCCTTCGAATCATGGATCACTTCTCAAAGATCCTACATTCATGCATTGACTGGATGGCTTCTTCGGTGCATGAGATCTGAGCCTGACATATCAAAGTTACCATGCTCTCCCCATAGGTCCAGTGGCACTCACCCTTTGTTTGGACTCTGTGTTCAGTGGTCAAGGCACCTAGATGCTATACAAGAAAAGGCGGTGCTTGATGGTTTAGACTTCTTTGCAGCCGGAATGGGGTCCCTCTATGCACATCAGTTAAGAGAAGATTCTAGGAGAAACTCATATGGATCAAAACAAAGCAATGGGAATATGGAAATGGTGGAAGTTGGTGATGTGGAAGAGGTAATGGCTCCAGAGAAACTGGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGTGTTTGCTTTGGATTCTGCTGAGGGCTACAATGAAGTTGTTAACCAATGGGACAATGGGAACAATGGGAAGTATCAAAATACTACTACTTCTAGTTAG 2352 0.4294 MGCSHSRLDDEEAVRLCKDRKKFIKQAVEQRTRFATGHIAYIESLKRVSAALRDYIEGDEPREFSLDTVITPPFTPVKKKTGPGFIPLSAKPFATTGAIEFGIGPNSTLKVNYLRPGGNPAISVEERPQSPERVRVETYYSPMQHYGIDGFFNMQSSPANPSIFAYSPNNRPNIPPPSPQASQWDFFWNPFSSLDSYGYPSRSSLDQTAMDDEYRGLRQVREEEGIPDLEEDENEHEDCIGKRNVAEERTRHNVNSSKEDVIVEDVDDDDDDDDEEEEEEEEEEEDEDEEEEVETDIEDETATEHDAKDSQAHGSASFKVSKAQAAGHIKSRHREMTIGKQEAMEETPGFTVYVNRRPTSMAEVINDLETQFTIVCNAANDVGALLEAKKSQYLLTSSELSASKYLSPVALLRSASSHSSSSRFLVNCSSTGKEGCEGTKDISNEHCMLSGSHHTTLDRLDTWEKKLYEEVRCGERVRIAYEKKCKQLRNLDVKGEDPSCVDKTRAAIRELDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLERMWTVMAECHQIQKRTLDEAKILLAGTPSKSHARKQSSMSMTDPTRLARSASNLEFELRNWRNAFESWITSQRSYIHALTGWLLRCMRSEPDISKLPCSPHRSSGTHPLFGLCVQWSRHLDAIQEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSYGSKQSNGNMEMVEVGDVEEVMAPEKLAEVAIKVLCAGMSVAISSLAVFALDSAEGYNEVVNQWDNGNNGKYQNTTTSS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0835 783 Pfam Protein of unknown function (DUF632) 361 688 IPR006867 -
Aed4g0835 783 MobiDBLite consensus disorder prediction 250 337 - -
Aed4g0835 783 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Aed4g0835 783 Coils Coil 271 296 - -
Aed4g0835 783 PANTHER UNCHARACTERIZED 1 782 - -
Aed4g0835 783 Coils Coil 229 249 - -
Aed4g0835 783 MobiDBLite consensus disorder prediction 262 300 - -
Aed4g0835 783 PANTHER DUF630 FAMILY PROTEIN 1 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0835 Aed-Chr4 7250388 7255676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0835 447 718 Acyl Lipid Metabolism Gene Families AT2G27090 36.232 1.69e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0835 - - gmx:100780704 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0835 4 7250388 7255676 Aed4g0835 4 7250388 7255676 ECH
Aed6g2043 6 23178872 23181912 Aed4g0835 4 7250388 7255676 PCT