Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0804 ATGGCAGCAACCGTTCCTTTCTCTCTGCTTAGGAACTGCGCGCCACTGAAACTAGCAGCACCTTTCGCTCGCAAAGCCTCCAACTTTAATCTTCTTTTTATCCCTCTTCACCCCCGCAGGTTGGTCTCTAGTACTCATGCTGCCAACAATGAAGAGGCTGCAGCAAAAGCAGCTGCTATTAATTTTGACAGTGAAGCTCCAACAATATTTGATAAGATCATAAATAAGGAAATCCCTTCGAGCATTGTATATGAAGATGAAAAGGTTCTAGCATTTCGTGACATTAATCCTCAGGCTCCAGTTCATGTTCTAGTCATTCCAAAATTAAGAGATGGATTAACACAACTTGGGAAGGCTGATTGTAGGCATGGGGAAATATTGGGTGAACTTCTCTATGCTGCCAAAATTGTAGCTGAGAAAGAAGGTATTGTTGATGGATTCCGTGTTGTTATCAACAATGGTCCTAGTGCCTGTCAATCTGTGTATCATCTGCACTTGCATGTATTAGGTGGGAGACAGTTGAATTGGCCACCAGGTTGA 540 0.4296 MAATVPFSLLRNCAPLKLAAPFARKASNFNLLFIPLHPRRLVSSTHAANNEEAAAKAAAINFDSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKLRDGLTQLGKADCRHGEILGELLYAAKIVAEKEGIVDGFRVVINNGPSACQSVYHLHLHVLGGRQLNWPPG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0804 179 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 36 179 - -
Aed4g0804 179 Gene3D - 44 179 IPR036265 -
Aed4g0804 179 CDD PKCI_related 67 171 - -
Aed4g0804 179 PRINTS Histidine triad family signature 159 169 IPR001310 -
Aed4g0804 179 PRINTS Histidine triad family signature 90 108 IPR001310 -
Aed4g0804 179 PRINTS Histidine triad family signature 69 85 IPR001310 -
Aed4g0804 179 SUPERFAMILY HIT-like 67 178 IPR036265 -
Aed4g0804 179 Pfam HIT domain 76 173 IPR011146 GO:0003824
Aed4g0804 179 ProSiteProfiles HIT domain profile. 69 179 IPR011146 GO:0003824
Aed4g0804 179 PANTHER HISTIDINE TRIAD HIT PROTEIN 36 179 IPR001310 -
Aed4g0804 179 ProSitePatterns HIT domain signature. 152 170 IPR019808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0804 Aed-Chr4 6949632 6952587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0804 - - gmx:100500187 313.153