Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0802 ATGACAATGCAAATCTCTAGTAAAACGTTTGACCGAGCACCAAGTATTCGGCAGCTATTTCCACCCAAAAATCTTGAGGAGAGCAATGAATGTGACACATGTTCTGTTCAGTTCATCAACCATCAATGTAATACACCAGAAAGCAGAATCCATCAATGCTATAGTTCAAAACCACTTCTGTTAGAAGATGTGGTTCCTAGCCCCAGAAATTCCATATCTTCCAATGCCATCGAACATGCTGTATCAATATATCAACCAGTTGGTAGGTCAGGTACTTCTGCAATTTCATCTCTTCAAGATAACAACACTGCACTTTGTTTTGCTGCTGCATCTGGGGTTACCAAGATAGCAAAGCTGATGGTGGAAAGGAATATAAACTTACCTGGAATACGAGGGATCCAAGTTAAACTAGCAACTGACTACAGATGCCAGTCTAGCATCTACCAATCTCAGGCACCTTTGACTTTTCAAGATAACCTATTGGTGACTGGACTCTGTCAAGCTGTAAAATATCTTGTGCCAGGATTTGAAGCAGTTCAGAAGAAAAAGACATTGAACACACAGGCTTTGAAGTTAGTGCAACGTCTTTGGGAATTAATAGTGACTTCAGAAGAAATACAACATGGAGACTTGATTAAAAGCCATTTGTCGGGACCCCTATTTTTTGTTGCTGAAGCTGGGATACCTGAGATTGTAGTTGAGCTTCTTTACTCATATCCAGATCTACTTTGGAAAGTTGACAGCCAAAATCGAAGTCTTTTTCACATTGCAATCATGTATTGTCGGGAAAAAATATTTAACCTGATTTATGACATAGGGGCGCATAAGGATCTGATAACTTCTTACAGAGACAACAACAACAATCACAACATACTGCGTTTGGCTGGAAAATTGGCCCCTTCAGATCAACTTCATGTTGTATCTGGTGCAGCATTGCAGATGCAAAGGGAATTATTGTGGTTCAAGGAGGTAGAAAAGATCATACAACCTCTTTTCAAGGAGATTAAGGATTCTGAAGCAATCTTTACAGTACCGGGCGGCAACAACAACAACAATGGCTACCCTATTTTTATGCACACTACATCCTTCAAAGTTTTTGCTCTCTCAGATGCTCTTGCATTGTTCTCCTCAGTAATATCTGTGTTGATGTTTTTGTCCATACTCACCTCAAGATATGCACAGGAGGATTTCCTTGTGTCACTGCCTAGAAGGTTGAGTGTTGGCATTGCAACCCTTTTCTTCTCCATCATTACAATGCTCATAGCTTTTGGTGCAACGTTTTTCATTGTACTTGGCCATCAATTGGCATGGATTGTCATTCCTACAACCCTTGTTGCTTGTATCCCTGCAATATTGTTTGCCTTTTTACAGTTTCCTCTTCTTGCTGATACAATCTCATGTACATATGGAGCCGGTGTATTTGCTCGTTGGGGGTAA 1437 0.4036 MTMQISSKTFDRAPSIRQLFPPKNLEESNECDTCSVQFINHQCNTPESRIHQCYSSKPLLLEDVVPSPRNSISSNAIEHAVSIYQPVGRSGTSAISSLQDNNTALCFAAASGVTKIAKLMVERNINLPGIRGIQVKLATDYRCQSSIYQSQAPLTFQDNLLVTGLCQAVKYLVPGFEAVQKKKTLNTQALKLVQRLWELIVTSEEIQHGDLIKSHLSGPLFFVAEAGIPEIVVELLYSYPDLLWKVDSQNRSLFHIAIMYCREKIFNLIYDIGAHKDLITSYRDNNNNHNILRLAGKLAPSDQLHVVSGAALQMQRELLWFKEVEKIIQPLFKEIKDSEAIFTVPGGNNNNNGYPIFMHTTSFKVFALSDALALFSSVISVLMFLSILTSRYAQEDFLVSLPRRLSVGIATLFFSIITMLIAFGATFFIVLGHQLAWIVIPTTLVACIPAILFAFLQFPLLADTISCTYGAGVFARWG 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0802 478 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 100 471 - -
Aed4g0802 478 Pfam Domain of unknown function 340 429 IPR026961 -
Aed4g0802 478 SUPERFAMILY Ankyrin repeat 98 281 IPR036770 -
Aed4g0802 478 Gene3D - 85 308 IPR036770 -
Aed4g0802 478 SMART ANK_2a 100 129 IPR002110 GO:0005515
Aed4g0802 478 SMART ANK_2a 249 278 IPR002110 GO:0005515
Aed4g0802 478 PANTHER CASKIN 100 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0802 Aed-Chr4 6940543 6943445 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0802 340 448 Miscellaneous Gene Families AT3G12360 31.193 7.72e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0802 - - gmx:100814269 604.749