Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0777 ATGGAAGAACAAAAAGAGTGCCAAGTTCAGGAAAAGAAGGAAAGTCCTCCAACTCCTGTTCGAGTCTACGCTGATGGGATTTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTCGAGCAAGCCAAAAAAGTGTTTCCAAACACTTATCTTCTTGTTGGATGCTGCAATGATGAGATCACCCATAAGTATAAGGGCAAAACTGTTATGACTGACAAGGAACGCTGTGAGTCTCTTCGCCACTGCAGGTGGGTTGACGAAGTTATTCCAGATGCGCCATGGGTAATCACTCAGGAGTTCCTTGACGAGCATCAAATTGACTATGTGGCACATGATAGTCTTCCTTATGCTGATGCAAGTGGAGCTGGAAAGGATGTGTATGAATATGTTAAGTCTGTTGGAAAATTTAAGGAAACACAACGAACTGAAGGAATTTCTACTTCTGATATCATAATGAGAATTATAAAAGATTATAATCAATATGTATTGCGTAATTTGGACCGTGGATATACGAGAAAGGAGCTAGGTGTCAGCTATGTCAAGGAGAAGAGATTGAGAATGAACATGGGACTTAAAAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGAGAGTAGGACAGAAGATTCAAACGGTGGGGAAAATCGCCGGAATGCACCCTAATGAATGGGTCGAAAACGCTGATCGTTTGGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATCAGAGACAGAATACAAGAACAATTAAAGGCACAACAGCTGAAATCACTTCTCTACGATGAGTGGGATGATGATGATGAATTCTATGATGATGATGAATACTACACTGATTGA 858 0.4126 MEEQKECQVQEKKESPPTPVRVYADGIYDLFHFGHARSLEQAKKVFPNTYLLVGCCNDEITHKYKGKTVMTDKERCESLRHCRWVDEVIPDAPWVITQEFLDEHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKETQRTEGISTSDIIMRIIKDYNQYVLRNLDRGYTRKELGVSYVKEKRLRMNMGLKKLQERVKKQQERVGQKIQTVGKIAGMHPNEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLKAQQLKSLLYDEWDDDDEFYDDDEYYTD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0777 285 Pfam Cytidylyltransferase-like 23 152 IPR004821 GO:0003824|GO:0009058
Aed4g0777 285 PANTHER CYTIDYLYLTRANSFERASE 1 281 IPR045049 GO:0004105|GO:0006657
Aed4g0777 285 Gene3D HUPs 1 240 IPR014729 -
Aed4g0777 285 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 1 281 - -
Aed4g0777 285 Coils Coil 191 211 - -
Aed4g0777 285 SUPERFAMILY Nucleotidylyl transferase 21 153 - -
Aed4g0777 285 CDD CCT 19 169 IPR041723 -
Aed4g0777 285 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 21 88 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0777 Aed-Chr4 6491609 6496399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0777 46 283 Acyl Lipid Metabolism Gene Families AT2G32260 77.593 6.18e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0777 K00968 - gmx:100786249 510.375