Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0772 ATGGCCTCAAACTCCATGGCTGGCTTGATCACCGGTTCGAATAACTCTCACTTCTCACGTGACTCCGACGATCATCAGGCTCCTCCTGCTGCCCGTCAAGCTTCATCGAAAAGTAGCACGTGTCGAGTTTGTGGCGATGAGATTGGATACAAGGAAAATGGGGAGCTGTTTGTGGCTTGTCATGTGTGTGGATTCCCTGTTTGTCGACCGTGTTATGAGTATGAGAGGAGTGAAGGGAACCAGAGCTGTCCTCAATGCAACACTCGCTATAAGCGCCACAAAGGTTGTCCTAGAGTGGCTGGAGATGAAGAGGATAACTTTGATGCAGATGATTTTGATGATGATGAGTTTCCGGTTAAGAATCAACGTGAAGATCTAGATCGGCAGCATGATGTTAATCATATGGAAAATGGGGACTCCCATCAAGAGAAGTTGCATCTCAATGGTCAAGTTTTCTCTTCAGCTGGGAGTGTTGCAGAAGGGGACAAAGATTTCTACAGCAATGCAGAATGGGAAGAAAGAGTAGAGAAATGGAAAGTCAGGCAAGAAAAGAGAGGTCTTTTAAACAAAGAAGATGGAAAAGAAGACCAAGGTGAAGAAGATGATTACTTGTCTGCTGAAGCTAGACAACCATTGTGGCGCAAGGTTCCAATATCTTCAAGCTTAATCAATCCATATCGGATAGTGATTGTGTTGAGGCTGGTCATCCTTTGTTTCTTCTTCCGATTCCGTATCTTAACTCCAGCAAATGATGCATACCCCTTGTGGCTTATCTCTGTGATATGTGAGATATGGTTTGCACTGTCATGGATTCTTGATCAGTTCCCCAAGTGGTTCCCCATCACGCGTGAGACTTACTTGGACCGGTTGTCCTTGAGGTTCGAGCGTGAAGGGGAGCCGAACCAGCTAGCTCCAATTGATTTCTTTGTGAGTACAGTGGACCCTTTGAAGGAGCCTCCCATTATAACAGCCAACACTGTCCTCTCAATCCTTGCTGTTGACTATCCTGTTGACAAAGTCAGCTGCTATGTCTCGGATGATGGTGCATCTATGCTTCTGTTTGATTCCTTGGCAGAAACTGCTGAGTTTGCAAGAAGATGGGTTCCCTTTTGCAAGAAGTATAACATAGAGCCAAGGGCTCCTGAGTATTACTTTGGTGAGAAAATTGATTACTTGAAGGATAAGGTGCAGCCTACATTTGTGAAGGAAAGAAGGGCCATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATTAATTCTTTGGTGGCAAAGGCTCAGAAGAAACCTGAGGAGGGGTGGGTGATGCAAGATGGAACTCCATGGCCAGGGAACAACACTCGTGATCATCCAGGAATGATTCAGGTATATTTAGGAAGTGCTGGTGCATTAGACGTGGAAGGCAAGGAACTTCCTAAACTTGTGTATATTTCACGTGAAAAACGTCCTGGCTATCCACATCACAAGAAAGCAGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCTGTGCTTACAAATGCACCATTCATGTTGAATCTGGATTGTGATCACTACGTCAATAACAGCAAGGCAGTAAGAGAGGCCATGTGCTTTTTAATGGACCCTAACCTTGGGAAGAAGCTGTGTTATGTCCAATTTCCACAGAGATTTGATGGTATTGATCGCCACGATCGGTATGCTAACCGAAACACAGTGTTCTTTGATATCAATATGAAAGGGCTTGATGGGATTCAAGGTCCAGTATATGTCGGTACTGGAACCGTGTTCAACAGGCAGGCATTGTATGGCTATGATCCACCAGTATCTGAGAAAAGGCCAAAGATGACATGTGACTGCTGGCCATCATGGTGTTCCTGTTGCTGTGGCAGTTCGAGGAAATCCAAGTCAAAAAAGAAATCAGTAAAGGGTCTCTTCAGTGTGTTCTCCAAGAGCAAGAGCAAGAAGAAAATGATGGGGAAAGACTATGTTAGGAAAGGATCAGGGTCCATGTTTGATCTTGAAGAGATTGAAGAAGGCCTTGAAGGGTATGAGGATCTAGAGAAGTCATCCCTCATGTCCCAGAAAAGCTTTGAGAAGCGATTTGGGCAATCACCGGTGTTCATTGCTTCCACCTTGATGGAAAATGGAGGACTTCCTGAAGGCACAAATAGCCAATCATTGGTCAAGGAGGCCATTCATGTTATAAGCTGTGGCTATGATGAGAAGACTGAATGGGGCAAAGAGATTGGGTGGATTTATGGCTCAGTCACAGAAGATATTTTGACTGGATTCAAGATGCACTGCAGAGGATGGAAATCAGTGTATTGCATGCCAAAGAGACCAGCATTCAAGGGATCTGCTCCAATAAATCTATCAGATAGGTTGCACCAAGTTCTGAGGTGGGCTCTTGGTTCTATTGAGATTTTCCTTAGTCGCCATTGCCCCTTGTGGTATGGCTATGGAGGAAAACTTAAGTACCTACAGAGGATGGCTTACACTAACACCATTGTTTATCCATGGACTTCCATCCCTCTGCTTGCATACTGCACAATTCCAGCTCTGAACAACCTTGCTAGCATTTGGTTTATGGCTCTATTTATCGCCATCATATTAACTAGTGTGCTTGAGCTCCGATGGAGTGGTGTTACCATTGAAGCCCTATGGCGTAACGAGCAGTTCTGGGTCATTGGAGGTGTTTCTGCTCACCTTTTCGCCGTGTTCCAAGGCCTCCTCAAGGTTCTTGGTGGAGTGGACACCAACTTCACAGTCACAGCAAAAGCAGCAGAAGACACTGAATTTGGAGAGCTCTATCTCTTCAAATGGACCACTCTTCTGATCCCTCCAACCACTCTCATAATCTTGAACATTGTTGGAGTTGTGGCTGGAGTCTCTGATGCCATCAACAATGGATATGGCTCATGGGGACCTTTGTTTGGGAAGCTTTTCTTTGCCTTTTGGGTCATTGTTCACTTGTATCCTTTCCTCAAAGGTCTCATGGGAAAGCAAAACAGGACTCCTACCATTGTGGTGCTGTGGTCAATCCTTTTGGCATCTATTTTCTCATTGATTTGGGTCAGGATTGATCCCTTCTTGCCCAAGCAAACTGGTCCAGTGCTCAAACAATGTGGGGTGGAATGCTAA 3117 0.4491 MASNSMAGLITGSNNSHFSRDSDDHQAPPAARQASSKSSTCRVCGDEIGYKENGELFVACHVCGFPVCRPCYEYERSEGNQSCPQCNTRYKRHKGCPRVAGDEEDNFDADDFDDDEFPVKNQREDLDRQHDVNHMENGDSHQEKLHLNGQVFSSAGSVAEGDKDFYSNAEWEERVEKWKVRQEKRGLLNKEDGKEDQGEEDDYLSAEARQPLWRKVPISSSLINPYRIVIVLRLVILCFFFRFRILTPANDAYPLWLISVICEIWFALSWILDQFPKWFPITRETYLDRLSLRFEREGEPNQLAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDSLAETAEFARRWVPFCKKYNIEPRAPEYYFGEKIDYLKDKVQPTFVKERRAMKREYEEFKVKINSLVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPNLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPSWCSCCCGSSRKSKSKKKSVKGLFSVFSKSKSKKKMMGKDYVRKGSGSMFDLEEIEEGLEGYEDLEKSSLMSQKSFEKRFGQSPVFIASTLMENGGLPEGTNSQSLVKEAIHVISCGYDEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSIEIFLSRHCPLWYGYGGKLKYLQRMAYTNTIVYPWTSIPLLAYCTIPALNNLASIWFMALFIAIILTSVLELRWSGVTIEALWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPVLKQCGVEC 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0772 1038 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 30 124 - -
Aed4g0772 1038 Pfam Cellulose synthase 306 1031 IPR005150 GO:0016020|GO:0016760|GO:0030244
Aed4g0772 1038 CDD mRING-HC-C4C4_CesA_plant 40 89 - -
Aed4g0772 1038 Pfam Zinc-binding RING-finger 36 106 IPR027934 -
Aed4g0772 1038 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 30 124 - -
Aed4g0772 1038 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 165 1038 - -
Aed4g0772 1038 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 165 1038 - -
Aed4g0772 1038 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 115 IPR013083 -
Aed4g0772 1038 SUPERFAMILY Nucleotide-diphospho-sugar transferases 319 841 IPR029044 -
Aed4g0772 1038 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 420 598 IPR029044 -
Aed4g0772 1038 Coils Coil 404 424 - -
Aed4g0772 1038 MobiDBLite consensus disorder prediction 1 17 - -
Aed4g0772 1038 MobiDBLite consensus disorder prediction 1 34 - -
Aed4g0772 1038 SUPERFAMILY RING/U-box 33 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0772 Aed-Chr4 6455557 6461897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0772 40 1038 Glycosyltransferase AT5G05170 65.009 0.0 1409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0772 K10999 - gmx:100781996 1949.87