Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0769 ATGTCTTCTTCTGCCACTGCCTCAAACACTCTCTTCCTTCACTCTTGTTTCCTCCTCTTCTGTCTCCTCTCTGCTCCTTCCTGTGTTTCCATGTTCTCTGGTATTGAGACAGGAGATTTAGAAAAAAGAGATGATTTGTTTCCACAGATTCTAAGGGACGAGGCAGTGGCAAGGCTTTACGAGCTTGGAAAGGTGAGTGATGCCAGTGGTTATTTGGAGAGAACATTCTTGAGTCCTGCATCCATGAGGGCAATTGATCTTATTCGTAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGATCTAATGGGAAATGTACATGGTCGAGTCGATGGTGCAAATGCAAATGCTGGAGCTTTATTGATTGGATCCCACATGGACACTGTTGTTGATGCTGGGATGTTTGATGGATCACTAGGAATAGTCTCTGCAATATCTGCATTGAAGGCTATGCATGTCAATGGAAAGCTGGAAAAGCTAAAGCGCCCCGTTGAGGTGATTGCATTCAGTGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTGGGCAGTGGTGCTATAGCTGGTATTTTGCCTGGTACAACATTGGAGATATCTGATAAGAGGGAGGTGATGATTAAAGATTTTCTCAAGAAGAACTCAATAGACATTACAGAAGAACGTCTTTTAAAGCTCAAGTATGATCCAAAGTCTGTTTGGGGTTATGTTGAGGTTCACATTGAGCAGGGGCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTACAGTTAGAGGTTCACAAGGTCATGCTGGAACAGTTCCAATGTCCATGCGCCAGGATCCAATGGCTGCTGCTGCGGAACAAATTGTAACCTTGGAAAGCCTCTGTAAACACCCTGAAGAATACCTTTCTTATGATGGTCATTGCAGTGATTCAACAGTGAAATCACTGTCAAGCTCACTTGTTTGTACTGTTGGAGAGATATCAACATGGCCAAGTGCCAGCAATGTCATTCCAGGCCAGGCAAGCAATGAATTTCTAAAAATGCATCTGACCCTGGAATGTCAAAGTGAGCACGTTACATACACTGTGGATATACGAGCGATCGATGACCTTGGACGCGAGGCTGTTATCTATGATTTATCAAAACAAATTTACCAAATATGTGACAAGCGTTCAGTTTCCTGCATTATTGAGCACAAGCATGATGCAGGTGCTGTGATTTGTGATTCTGATATGAGTTCACAGCTCAAGTCGGCAGCTTATTCTGCACTCAAGAAAATGGAGGGTGACATTCAGGATGAAGTGCCAACATTAATGAGCATAAGTCATTCTCCTCAAGAACATGTGCTAGACAATGATGTCTGGGCGGCTGGATTAGCAACCTTGTCATTTCTGGAAAATCTATCATAA 1401 0.434 MSSSATASNTLFLHSCFLLFCLLSAPSCVSMFSGIETGDLEKRDDLFPQILRDEAVARLYELGKVSDASGYLERTFLSPASMRAIDLIRKWMEDAGLRTWVDLMGNVHGRVDGANANAGALLIGSHMDTVVDAGMFDGSLGIVSAISALKAMHVNGKLEKLKRPVEVIAFSDEEGVRFQTTFLGSGAIAGILPGTTLEISDKREVMIKDFLKKNSIDITEERLLKLKYDPKSVWGYVEVHIEQGPVLEQVGFPLGVVTVRGSQGHAGTVPMSMRQDPMAAAAEQIVTLESLCKHPEEYLSYDGHCSDSTVKSLSSSLVCTVGEISTWPSASNVIPGQASNEFLKMHLTLECQSEHVTYTVDIRAIDDLGREAVIYDLSKQIYQICDKRSVSCIIEHKHDAGAVICDSDMSSQLKSAAYSALKKMEGDIQDEVPTLMSISHSPQEHVLDNDVWAAGLATLSFLENLS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0769 466 PANTHER ALLANTOATE DEIMINASE-RELATED 42 459 - -
Aed4g0769 466 Gene3D Zn peptidases 66 418 - -
Aed4g0769 466 PANTHER ALLANTOATE DEIMINASE-RELATED 42 459 IPR010158 GO:0016813
Aed4g0769 466 Gene3D - 258 401 - -
Aed4g0769 466 SUPERFAMILY Zn-dependent exopeptidases 47 465 - -
Aed4g0769 466 Pfam Peptidase family M20/M25/M40 122 421 IPR002933 GO:0016787
Aed4g0769 466 PIRSF Amidase_hyd_carb 48 343 IPR010158 GO:0016813
Aed4g0769 466 PIRSF Amidase_hyd_carb 350 426 IPR010158 GO:0016813
Aed4g0769 466 PIRSF Amidase_hyd_carb 432 466 IPR010158 GO:0016813
Aed4g0769 466 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 121 130 IPR001261 -
Aed4g0769 466 SUPERFAMILY Bacterial exopeptidase dimerisation domain 256 400 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0769 Aed-Chr4 6399838 6403789 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0769 K02083 - gmx:100819399 807.749