Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0752 ATGCCACAACCAAAAGAGCTTCCAGGGTTTTATTATGACCCTGAGAAGAACAGGAAAGTGGTGGGGGTTGTTCTAGGAAGCTTAGAAACAGAACCTCGTCTAAGCTGCTTCAGGCTAGGGAGTTGGATGGTCGCCGTGGTGTCATTGCCTCTCGCTTCAGAAGTCTGGAGGTATCGGGGAACTGATAGGATGCGTATTACTGCTTTGGAACACTTGCGTGTTGACGTGCAGACGTTGGAGGGGAAAAATGAAACTGATATTTTGTTGACGGGCAGCACAAATGGCTCAATGAGTGGGACAAAATGGAGGGCAGATTGTGTGAGAAATTATGCTAAAGGGAGAACAGATGAGCATAATGAGCTGCTTGAGCCGGTTTTCAAACCTAATCGAGCTGCACTGCTTATGTCCTCTAGAATATCTTCTATAAGTTTGGGTCCAAAGTACTCTTCTCATGCTGTCAATCATGGTCATATTGTTGGACGTGCATTAGTTACTACTTTGGGATCAGAGACATCAGGTGGATCAGTTTATACTCTTGATCTTGTTGAACCATTAAATCTTGGACCAGGTATACGGAACACATGGAGCGGACTAGAGGAAATTGCTTCATTCAGGTGTACCATTTGGACAGCAGAGTACAAATTTGGGAGCTGCTTCAGTGGAACTGGAAACGGGGATGATATCATGGTTTTTATATTAAATGGGGCAGTTGTCACTGTTGATTCTCGTGAGAGAAGAGAAAACCTTTCTGGTAGACTTATTAGCCATCGGATACCATATGCATCTACAGACACAAAAGTTGGTCCTAGTAGAGAATGGTTCAAGTTTGATGATCAGTACTTCTTGGCAAGCTCAATGGATGGATCGATTAGACTCTATGATCTCCGTCTACTTCAGAGGGGTGCTGTTCAATGTTATGAAGGGCATGTGAATTCTCATACTCGTATACAGATTGGTGTTGATCCAACTGAGAAATTTGTTATGTCAGGTGGAGACGATTGCAAGCTAAGGTTATGGAGTATCAAGTCTGGTGAACTGCTTTTCGAGGACAGGTTCTCCAATTCAGCTATCTCCACCATATGTTTTAAAGTAGACAAGGAAAACCAATACAAGTGCGAATCTTCTCAGGGAGCATGGCTTGGATCACTTGAAGGACTGTTTTATATGTGCTGGTTATGA 1179 0.4334 MPQPKELPGFYYDPEKNRKVVGVVLGSLETEPRLSCFRLGSWMVAVVSLPLASEVWRYRGTDRMRITALEHLRVDVQTLEGKNETDILLTGSTNGSMSGTKWRADCVRNYAKGRTDEHNELLEPVFKPNRAALLMSSRISSISLGPKYSSHAVNHGHIVGRALVTTLGSETSGGSVYTLDLVEPLNLGPGIRNTWSGLEEIASFRCTIWTAEYKFGSCFSGTGNGDDIMVFILNGAVVTVDSRERRENLSGRLISHRIPYASTDTKVGPSREWFKFDDQYFLASSMDGSIRLYDLRLLQRGAVQCYEGHVNSHTRIQIGVDPTEKFVMSGGDDCKLRLWSIKSGELLFEDRFSNSAISTICFKVDKENQYKCESSQGAWLGSLEGLFYMCWL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0752 392 PANTHER KATANIN P80 SUBUNIT 54 252 - -
Aed4g0752 392 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 234 390 - -
Aed4g0752 392 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 54 252 - -
Aed4g0752 392 ProSiteProfiles Trp-Asp (WD) repeats profile. 306 349 IPR001680 GO:0005515
Aed4g0752 392 Gene3D - 152 382 IPR015943 GO:0005515
Aed4g0752 392 PANTHER KATANIN P80 SUBUNIT 234 390 - -
Aed4g0752 392 Pfam WD domain, G-beta repeat 304 340 IPR001680 GO:0005515
Aed4g0752 392 SUPERFAMILY WD40 repeat-like 274 365 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0752 279 362 Miscellaneous Gene Families AT5G08390 25.000 1.45e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0752 K11799 - gmx:100798753 549.28