Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0746 ATGCGTCCTCGTTCTCGATCTCGTTATGGATTCGGGATTCCCCAAATTACCCTCCGAGTTAGAGCAACGAGGATGATGTTGTTATTGTTTTTATTTTCGGCACGCGCGGCGTCGGGTTTGAACCTCACCGCCCTACTCTCCACCCTGCCGGAGCTCTCCCAATTCGCCTCGCTCCTCTCCTCCGCCACGCCCCTCGCCGCGGATCTCTCTGACCGCTCCTCCCTCTCCCTCCTCGCCGTCCCCAACGCCTACCTCGCCGCCGACGACCACCTCTCCCGCCACCACCTCTCCCCGGCCGCCCTCGCCGACGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTCTCCTGGTCCGACCTCCGTGCCCTCCCCCCCTCCGGCAAGCTCGTCACCACGCTCCTCCAGACCACCGGACGTGCCACCGACAACTTCGGGTCCGTGAACCTCACGCGCGACCCCCAGTCCGGCGTCATCTCGATCCGCTCACCCGCCCCTTACTCCCCCTCCAACGCCACCGTCATTTCCCTCGTCAAAACCCTACCTTACAACGTGACCATCTTCGCCGTCAATTCCCTCCTCATCCCCTACGGCCTCGACCTCATGGCCTCCGAAACCCGCCCCAACATCGTCCTCAACATCACCAAAGCCCTCGTCGATGGCCACAACTTCAACGTCGCCGCCTCCATGCTCGCCGCCTCCGGTGTCGTCCAGGAATTTGAGGCTGATGAGGGTGGTGCCGGAATCACGCTTTTCGTCCCCGTGGATGACGCATTCGCCGATCTCCCTCCCTCTGTAGCTCTACAATCTCTTCCCGCGGATAGGAAAGCCATTGTTCTTAAATTCCACGTGCTCCATTCGTATTACCCTCTCGGTTCTCTTGAATCCGTTGTTAACCCCTTTCAACCTACCCTCGCCACTGAGGCCACCGGTGCTGGCAGATTCACGCTCAACATTTCGCGTGTCAACGGCTCCGTCGCCATCAACACCGGCGTCGTGCAGGCCTCAATTACGCAGACCGTGTTTGATCAGAATCCCGTCGCCATTTTTGGGGTCTCCAAGGTTCTCTTGCCGAGGGAGATTTTCGGGAGAAATCCGGTAGTGTCCACTAAGCCTCTAGATAGCGCTCCTCCGCCGGAGGATGACTTGCTGTCGCCGGAGAATTCGCCAGGATTTGATGGACAGCCCTCACACCTGTCGTCACCGCCAGGGTTTCGTGAAGATGTGAAGTCTCATGCTGGTGGTTCTGGTGGTTCCTTGAACTTTGTTCTTTGCTGTATAGGATTGTATTTTGTGGTATAG 1296 0.5887 MRPRSRSRYGFGIPQITLRVRATRMMLLLFLFSARAASGLNLTALLSTLPELSQFASLLSSATPLAADLSDRSSLSLLAVPNAYLAADDHLSRHHLSPAALADVLRYHVLLQFLSWSDLRALPPSGKLVTTLLQTTGRATDNFGSVNLTRDPQSGVISIRSPAPYSPSNATVISLVKTLPYNVTIFAVNSLLIPYGLDLMASETRPNIVLNITKALVDGHNFNVAASMLAASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADRKAIVLKFHVLHSYYPLGSLESVVNPFQPTLATEATGAGRFTLNISRVNGSVAINTGVVQASITQTVFDQNPVAIFGVSKVLLPREIFGRNPVVSTKPLDSAPPPEDDLLSPENSPGFDGQPSHLSSPPGFREDVKSHAGGSGGSLNFVLCCIGLYFVV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0746 431 Pfam Fasciclin domain 221 356 IPR000782 -
Aed4g0746 431 Gene3D FAS1 domain 32 194 IPR036378 -
Aed4g0746 431 SMART fasc_3 248 357 IPR000782 -
Aed4g0746 431 MobiDBLite consensus disorder prediction 366 409 - -
Aed4g0746 431 SUPERFAMILY FAS1 domain 216 356 IPR036378 -
Aed4g0746 431 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 25 429 - -
Aed4g0746 431 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 25 429 IPR033254 -
Aed4g0746 431 ProSiteProfiles FAS1/BIgH3 domain profile. 39 192 IPR000782 -
Aed4g0746 431 Gene3D FAS1 domain 210 357 IPR036378 -
Aed4g0746 431 ProSiteProfiles FAS1/BIgH3 domain profile. 209 354 IPR000782 -
Aed4g0746 431 SUPERFAMILY FAS1 domain 40 195 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0746 Aed-Chr4 6213929 6216387 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0746 - - gmx:100788356 752.281