Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0738 ATGCAGCTTGAGGAGCAAGTTGCTGAGGTTGAAAATTTCTACCGGAACATTAATGCTCAAGTTAATAATGCCAAAGACAAAGGGCGGGAGAAGCATGTTATTGGAGCTAAAAGGTCACAGCAGGGTGCATCAAGTAATTCTTCTAACACAGTGAAAGAGGTTATGCACCAGTTCTCCACAATATTGCATCAGGCAAGTGCAAATACCTTGCAACTATTGTTTGTTATTTCAGATTTCAATTGTTGGGTTAAGATATCAAAATTTACAATCATGGACCTACTTGGGAAATTGGTCATACACCACTTGAACCGATCATACACCGACTTGTCATCTTTTGCCTATGAGGCTCCATTTGACCATATAACTAAGCATACATGGGCTTGGCCATTCATGGATCCTGTAGATGTTAAAGGTCTTGGGCTGCATGACTATCATGAGATTATCAAGAAGCCTATGGATTTTGGTACAATAAAAAGGAAAATGGATGCTAAGGATGGTTCTGGCTATAAGAACGTGCGCGACATATACACGGATGTCAGGTTGGTTTTTAAGAATGCAATGAGATACAATGATGAAAAACATGACATCCATGTTATGGCAAAGACATTGCTGGAAAAATTTGAGAAGAAATGGCTGCAGCTATTGCCTAAAGTTGCTCAGGCGGAAAGTGAAAAGTTAAAGGAAGAAGCATATTTGCAGTTGGAAATGCAGCTTGCTCAAGAAGCTACTTATGCCAATATGGCAAAGGACATAAGCCTTTCGCTGTGCGATGTTGAAGTGCACTTAAAGTATCTCAAAGAAATGGTGCTTGAAAAGTGCAGGAAACTATCAACTCATGAGAAACTGGCACTTGTGGAATATTTCAACAGACTGAATCTTGACAATCTCTACAAGGCAATCGACATAGTTCATGAGAATGACTCAACCTACGAACCTCTTGCTCTACATGCTCAAGATGTCCAACTTGACCTTGATCATCAGAGCGACTACACACTGTGGAAACTAAATGTTTTTCTCAAAAAAACAGTGGAAGATCAGGACAGAGCTGTTGCTGAGGGGATAGCTGTTAACAGCAACCTTAACACTGAGGACATGAAAAACACCAACAAAAGGAAGAGACTGTGA 1125 0.4027 MQLEEQVAEVENFYRNINAQVNNAKDKGREKHVIGAKRSQQGASSNSSNTVKEVMHQFSTILHQASANTLQLLFVISDFNCWVKISKFTIMDLLGKLVIHHLNRSYTDLSSFAYEAPFDHITKHTWAWPFMDPVDVKGLGLHDYHEIIKKPMDFGTIKRKMDAKDGSGYKNVRDIYTDVRLVFKNAMRYNDEKHDIHVMAKTLLEKFEKKWLQLLPKVAQAESEKLKEEAYLQLEMQLAQEATYANMAKDISLSLCDVEVHLKYLKEMVLEKCRKLSTHEKLALVEYFNRLNLDNLYKAIDIVHENDSTYEPLALHAQDVQLDLDHQSDYTLWKLNVFLKKTVEDQDRAVAEGIAVNSNLNTEDMKNTNKRKRL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0738 374 PANTHER OSJNBA0053K19.4 PROTEIN 2 66 - -
Aed4g0738 374 PANTHER OSJNBA0053K19.4 PROTEIN 118 373 - -
Aed4g0738 374 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 2 66 IPR017413 GO:0005634|GO:0006355
Aed4g0738 374 PANTHER TRANSCRIPTION FACTOR GTE1-LIKE ISOFORM X1 118 373 IPR017413 GO:0005634|GO:0006355
Aed4g0738 374 Pfam Bromodomain 116 201 IPR001487 GO:0005515
Aed4g0738 374 PRINTS Bromodomain signature 178 197 IPR001487 GO:0005515
Aed4g0738 374 PRINTS Bromodomain signature 125 138 IPR001487 GO:0005515
Aed4g0738 374 PRINTS Bromodomain signature 141 157 IPR001487 GO:0005515
Aed4g0738 374 Pfam Bromodomain extra-terminal - transcription regulation 275 341 IPR027353 -
Aed4g0738 374 MobiDBLite consensus disorder prediction 26 49 - -
Aed4g0738 374 SUPERFAMILY Bromodomain 105 218 IPR036427 GO:0005515
Aed4g0738 374 ProSiteProfiles NET domain profile. 266 350 IPR027353 -
Aed4g0738 374 ProSiteProfiles Bromodomain profile. 122 197 IPR001487 GO:0005515
Aed4g0738 374 Coils Coil 7 27 - -
Aed4g0738 374 Gene3D - 16 234 IPR036427 GO:0005515
Aed4g0738 374 SMART bromo_6 103 216 IPR001487 GO:0005515
Aed4g0738 374 Gene3D - 270 349 IPR038336 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0738 Aed-Chr4 6162392 6165722 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0738 - - gmx:100795037 412.535