Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0734 ATGGCTCCCGTACCAATTTCTCCCATCAAAGTTGGTCACATTGATGATGTCCAAGAGCTTAGGAAAACCAAACCAAGGACAATTCCTCATAGATTTGTACGAGACACGACAGAAAGACCAATAACAACACTTACTACACCTCTTCCCCCACCACATAGTGACATGCCAGTCATTGATTTCTCCAAGCTTTCCAAAGGGACCAAAGAGGAAGTCCTCACTCAAATTTTCAATCTTGCAACTGCTTGTGAAGAGTGGGGGTTTTTTCAGGTAATTAATCATGAAATTGACCTCAATCTGCTGGAGAGCATAGAGAACCTGAGCAAGGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAATACCCTATGGCTCCAGGAACAGTCCAAGGGTATGGACAAGCCTTTGTTCTTACAAATGGAAAATACAGGAGTGTGGAGCATAGAGCTGTGGCTCATGAGGAGAAAGATAGGCTCTCAATTGTGACATTTTTTGCTCCTAGCTATGAAGTGGAACTTGGTCCAATGCCAGAGTTTGTGGATGAAGAAAACCACCCATGCAAGTATAGAAGATACAATCATGGAGAGTACAGTAAACACTATGTAACAAACAAGTTACAAGGAAAAAAGACTCTGGACTTTGCCAAGATCCAAACCATAAACACAAACTAG 669 0.4185 MAPVPISPIKVGHIDDVQELRKTKPRTIPHRFVRDTTERPITTLTTPLPPPHSDMPVIDFSKLSKGTKEEVLTQIFNLATACEEWGFFQVINHEIDLNLLESIENLSKEFFMLPLEEKQKYPMAPGTVQGYGQAFVLTNGKYRSVEHRAVAHEEKDRLSIVTFFAPSYEVELGPMPEFVDEENHPCKYRRYNHGEYSKHYVTNKLQGKKTLDFAKIQTINTN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0734 222 SUPERFAMILY Clavaminate synthase-like 135 216 - -
Aed4g0734 222 PANTHER PROTEIN SRG1 136 219 - -
Aed4g0734 222 Gene3D - 135 221 IPR027443 -
Aed4g0734 222 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 136 219 - -
Aed4g0734 222 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 136 - -
Aed4g0734 222 PANTHER PROTEIN SRG1 10 136 - -
Aed4g0734 222 Gene3D - 12 134 IPR027443 -
Aed4g0734 222 SUPERFAMILY Clavaminate synthase-like 15 135 - -
Aed4g0734 222 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 138 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0734 Aed-Chr4 6116646 6118818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0734 122 216 Glycosyltransferase AT5G59530 37.374 1.05e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0734 - - gmx:100820290 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0734 4 6116646 6118818 Aed4g0734 4 6116646 6118818 ECH