Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0716 ATGCTGGAGCGGTGCCTGGGAATGCGGCGCGTCCGGCAGATGCAGCGTGCCTGCCGCCACAGCACGGTGACGTTCCTCTGCCTGTTCCTGACGCTGGTGGTTCTCCGCGGCACAATCGGCGCCGGCAAGTTCGGCACGCCGGAGCAGGACTTCAACGAGATCCGCCACCACATCTCTGCCGCCCGCGCCCGCCGCGTCCTCGAAGAAACCAAACCCGATTCCGATTCAAACTCCAATTCCAATTCCAATTCAAACAACTACGCCACCTTCGATCTCTCCAAGATCCTCGTCGACGAGCCCCCCACCGACGACGAAAAAAAGGACCCAAACGCGGCCTACACGCTCGGCCCCAAAATCTCAGATTGGGACCAACAGCGCCGAGCCTGGCTCCGAGCCAACCCTGATTACCCAAACTTCATTGGACCCACCAAACCCCGCGTCCTCCTCGTAACCGGTTCCTCCCCCAAACCGTGCGAAAACCCGGTCGGAGACCACTACCTCGTGAAATCGATTAAGAACAAGATTGACTACTGCAGGGTCCATGGGATTGAGGTTTTCTACAACATGGCTCTCTTGGACGCTGAGATGGCAGGGTTTTGGGCCAAGCTTCCTCTCATTCGCAAACTCCTACTCTCTCACCCAGAAGTCGAGTTTCTCTGGTGGATGGACAGTGATGCAATGTTCACCGACATGGCCTTTGAGGTTCCCTGGGAGAGGTATAAAGATTCGAACTTTGTTATGCACGGCTGGAATGAGATGGTGTATGACGAGAAAAATTGGATTGGGTTGAACACTGGAAGTTTTTTGTTAAGAAACTGTCAATGGTCTTTGGATCTTCTAGATGCTTGGGCTCCAATGGGGCCCAAGGGGAAGATAAGAGATGAAGCTGGGAAAATTCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCAATGGTTTATTTGTTGGCCACTGGGAAGGAGAAGTGGGGTGACAAGGTTTACCTTGAGAATCACTACTACTTGCATGGCTATTGGGGGATTTTGGTGGATCGTTATGAGGAGATGATTGAGAACTACCACCCTGGGTTTGGGGATCATAGGTGGCCTTTGGTGACTCACTTTGTGGGGTGCAAGCCTTGTGGCAAGTTTGGGGATTACCCTGTGGAGAGGTGCTTGAAGCAGATGGATAGGGCTTATAACTTTGGGGATAACCAGATTTTGCAGATGTATGGGTTCACTCATAAGTCCCTTGCTAGCCGTAGGGTCAAGAGGGTGAGGAATGACACTAGCAACCCTCTTGAGGTTAAGGATGAGCTTGGATTGCTTCACCCTGCTTTCAAAGCTATCAAGCTACCTTCTTCTTGA 1365 0.5194 MLERCLGMRRVRQMQRACRHSTVTFLCLFLTLVVLRGTIGAGKFGTPEQDFNEIRHHISAARARRVLEETKPDSDSNSNSNSNSNNYATFDLSKILVDEPPTDDEKKDPNAAYTLGPKISDWDQQRRAWLRANPDYPNFIGPTKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEVFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDLLDAWAPMGPKGKIRDEAGKILTRELKNRPVFEADDQSAMVYLLATGKEKWGDKVYLENHYYLHGYWGILVDRYEEMIENYHPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHKSLASRRVKRVRNDTSNPLEVKDELGLLHPAFKAIKLPSS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0716 454 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 142 328 IPR029044 -
Aed4g0716 454 PANTHER - 4 453 - -
Aed4g0716 454 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 4 453 IPR008630 GO:0016021|GO:0016757
Aed4g0716 454 Pfam galactosyl transferase GMA12/MNN10 family 144 383 IPR008630 GO:0016021|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0716 Aed-Chr4 6004034 6005398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0716 1 454 Glycosyltransferase AT3G62720 75.764 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0716 K08238 - gmx:100818287 890.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0716 4 6004034 6005398 Aed4g0716 4 6004034 6005398 ECH