Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0704 ATGGAACCTTACAGCCTCTGTTTCTCATTGGAAATATTGACCCAACATATCAACACAATCATAGACCTTATTTTCTCACCTTATCATTGTTTTACTGTGCTTTTGGTTGCATGTCTAGCAACCACCCTTTTCTTTGCATGCAGAAGAAAAGCACCAATTTACTTGATAGACTTCACTTGCTACTGTCCACCCAGTTCCTCTAGGCTACCACTTGCAATGTTTGAAGAGAATCAGCTTTATGATAACATGGATCCAGAGGCTGTTGCTTTCCAATGCAAGATCATGGCCAAGTCAGGATTCAGTGAGCAAACATCCATTTCTTCATCTCTTGCTCAGATACCAAAAATAAAGGCCCTCTCTTTTGCCCTTGAGGAGGCTGAGACAATCATGTTCTCAGTAATCACAGACCTGTTTGAGAAACACAACATCAACCCGAAAGCCATTGACATTCTCATCACTAATAGTAGTGTGTTCTGTCCTACTCCATCTCTCAGTGCCATGGTGGTCAACAAGTTCAGAATGAGGAGCAACATCATGAGTTTCAACCTATCGGGTATGGGGTGCAGTGCTGGAATCATATCGATGAGTCTCGCTAAGGACTTGTTGAGAGTTCATAGGAACTCATTGGCTTTAATAGTGAGCACTGAGACACTAAGTCTGAATTGGTACACTGGTAAAGTCCCTTCTATGCTGCTATCTAATTGCCTATTCAGAATGGGTGGAGCAGCTATATTGATGTCTAGTAGGGTCCAAGATAAGCACAAGGCAAAGTATAAACTGCAGCATATTGTTAGAACAATCACTGCACAGGACGATCAATCTCATGGCTGTGTCTACCAACAAGTGGATCCTGAGAACAAAGAAGGTGTATCCATATCAAAGAACATAGTCAATGTGTCTGGAGATGCATTGAAGAAAAATATAGCTTCACTGGGACCTTTGGTTCTGCCTTTGAGGGAGCAATTCTTGTACATATTTTCCATTATTTGTCGCAAAATGTGTAGCACAAGGAAAATAAGCATCTATACTCCAAATTTCAACCATGCTTTTGAGCATTTCTGCATACATTCAGGGGGGAGAGCCATCATACAAGCTGTGGAAAGAAACTTGAGGCTGAGGAAACAGGACGCGGAGCCATCAACCATGACTCTTTACAGGTTTGGAAACATTTCATCTTCTTCGATTTGGTATGAGCTGAGCTACATAGAAGCAAAAGGGAGGATGAAAAGTGGGGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTGTGTGTGACGTTAAGCCAGACATTGCCACTGTATGGAGGGATACAATTCACTCATACCCTGTGGATATTTTGAGAACAAACTGA 1380 0.4203 MEPYSLCFSLEILTQHINTIIDLIFSPYHCFTVLLVACLATTLFFACRRKAPIYLIDFTCYCPPSSSRLPLAMFEENQLYDNMDPEAVAFQCKIMAKSGFSEQTSISSSLAQIPKIKALSFALEEAETIMFSVITDLFEKHNINPKAIDILITNSSVFCPTPSLSAMVVNKFRMRSNIMSFNLSGMGCSAGIISMSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDKHKAKYKLQHIVRTITAQDDQSHGCVYQQVDPENKEGVSISKNIVNVSGDALKKNIASLGPLVLPLREQFLYIFSIICRKMCSTRKISIYTPNFNHAFEHFCIHSGGRAIIQAVERNLRLRKQDAEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKSGDRVWQIAFGSGFKCNSAVWKCVCDVKPDIATVWRDTIHSYPVDILRTN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0704 459 Pfam FAE1/Type III polyketide synthase-like protein 47 333 IPR013601 GO:0006633|GO:0016020|GO:0016747
Aed4g0704 459 SUPERFAMILY Thiolase-like 261 432 IPR016039 GO:0016746
Aed4g0704 459 SUPERFAMILY Thiolase-like 43 249 IPR016039 GO:0016746
Aed4g0704 459 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 19 456 - -
Aed4g0704 459 Gene3D - 73 432 IPR016039 GO:0016746
Aed4g0704 459 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 350 431 IPR013747 -
Aed4g0704 459 PIRSF Very_long_ch_3-ktacl-CoA_syn 4 459 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed4g0704 459 PANTHER 3-KETOACYL-COA SYNTHASE 19 456 IPR012392 GO:0006633|GO:0016020|GO:0016747
Aed4g0704 459 CDD CHS_like 39 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0704 Aed-Chr4 5899904 5901283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0704 20 453 Acyl Lipid Metabolism Gene Families AT1G71160 53.318 7.24e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0704 K15397 - gmx:100783404 864.374