Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0671 ATGAATGAGAAGCGACGATTTTCGAAGCAAGGTGCCGCCGCTGCAAACGACGTGGCGGCGATGCAAGGGGTTCATTTCAAACTTCTAAGCAACATGGTGGTTCTCACTTTCACAGATGAGTTTACTAGCAATGTCCAGCCAAGAAGGTTGTTCAAGGCTTTGATCCTTGATGCTCCTAACCTCATCCCCAGGCTCTTGCCTGAGGCCATTAAGAATGTTCAACTGATTGAAGGAATTGGAGGCCCTGGAAGCATTCAGGAGATAACCATTGCTGAAGGCAAGTTGCACCATTTCACACTAATTTTCACTTTTGCATTCTTTTGTTGTTGCTGTGGTGATAAGATCAAACATTTGAAGCATAGAATTGATGCAATAGACCTGGAGAAATTGACTTACAGCTATGCAGTGATTGAAGGGGATGGTGCACTGGAAAAAGTGGATTCAATTTCACATGAGATCAAGTTCGAGGCTACTGAAGAGGGAGGTTGCAAGACCAAGAATGTCAGCAAGTATCATCCCAAAGAAGGGGTTGATGTTAAAGAGGAGGATTTCAAGGTTGCAAGGGAGGAAGGTTTGGCTCTCCTCAAGGTAGTGGATGCATATCTTGTGGCAAACCCAGAGGCCTATGCTGAAGGAAATGTAGAGGAAACAAAGACTTCAATTGGGGACGTTCACTTCAAACTTCTAAGAAACATGGTGGTCCTCACTTTCACAGATGAGTTTACTAGCAGTGTCCAGCCAGGAAGGTTGTTCAAGGCTTTGGTCCTTGATGCTCCAAACCTCATCCCCAAGCTGATGCCTGAGGCCATTAAGAATATTCAACTGGTTGAAGGGAATGGAGGCCCTGGAAGCATTCAGGAGATAACCATTGCTGAAGACCTAGAGAAATTGACATACAGCTACTCAGTGATTGAGGGGGATGGTGCACTGGAAAAAGTGGATTCAATTTCACATGAGGTTAAGTTCGAGGCTACTGAAGAGGGAGGTTGCAAGATCAAGAATGTCAGCAAGTATCATCCCAAAGCAGGGGTTGATGTCAAAGAGGAGGATTTCAAGGCTGCAAGGGAGGAAGGTTTGGCTCTCCTCAAGGCAGTGGATGCATATCTTGTGGCAAATCCAGAGGCCTATGCTTGA 1134 0.4559 MNEKRRFSKQGAAAANDVAAMQGVHFKLLSNMVVLTFTDEFTSNVQPRRLFKALILDAPNLIPRLLPEAIKNVQLIEGIGGPGSIQEITIAEGKLHHFTLIFTFAFFCCCCGDKIKHLKHRIDAIDLEKLTYSYAVIEGDGALEKVDSISHEIKFEATEEGGCKTKNVSKYHPKEGVDVKEEDFKVAREEGLALLKVVDAYLVANPEAYAEGNVEETKTSIGDVHFKLLRNMVVLTFTDEFTSSVQPGRLFKALVLDAPNLIPKLMPEAIKNIQLVEGNGGPGSIQEITIAEDLEKLTYSYSVIEGDGALEKVDSISHEVKFEATEEGGCKIKNVSKYHPKAGVDVKEEDFKAAREEGLALLKAVDAYLVANPEAYA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0671 377 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 32 94 - -
Aed4g0671 377 PANTHER - 112 210 - -
Aed4g0671 377 PANTHER - 32 94 - -
Aed4g0671 377 SUPERFAMILY Bet v1-like 35 209 - -
Aed4g0671 377 CDD Bet_v1-like 36 202 - -
Aed4g0671 377 PANTHER - 232 377 - -
Aed4g0671 377 Gene3D - 33 208 IPR023393 -
Aed4g0671 377 Gene3D - 233 375 IPR023393 -
Aed4g0671 377 PRINTS Major pollen allergen Bet V1 signature 361 371 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0671 377 PRINTS Major pollen allergen Bet V1 signature 234 254 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0671 377 PRINTS Major pollen allergen Bet V1 signature 327 343 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0671 377 SUPERFAMILY Bet v1-like 235 376 - -
Aed4g0671 377 CDD Bet_v1-like 236 369 - -
Aed4g0671 377 Pfam Pathogenesis-related protein Bet v 1 family 232 371 IPR000916 GO:0006952
Aed4g0671 377 Pfam Pathogenesis-related protein Bet v 1 family 32 204 IPR000916 GO:0006952
Aed4g0671 377 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 232 377 - -
Aed4g0671 377 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 112 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0671 Aed-Chr4 5634914 5639456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0671 - - gmx:100814569 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0671 4 5634914 5639456 Aed4g0671 4 5634914 5639456 ECH