Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0667 ATGGGTGTTGTTGTTACCCAGGAATACGATACACCTGTTGCTGTTCCTCCTACTAGGCTTTTCAAAGCCATGACCTTAGATTTCCACAACCTCTTCCCAAAGCTTGTGGATAGCATCCACAGCATTGTCGTAAGTGGCAGTGCCTTGATTGAGACATTGGAGAAGGTGTCATTCGAGAGCAAATTGGAGGAAGGCCCAAATGGAGGATCCATTAGGAAGGTGCGTGCCCAGTTTTTCCCCAAAGGGGATGCTACGCTTAGTGAGGAAGTGCTCAATGCGAACAAAGCCAAGGTCCAAGGCCTTGTAAAGCTTGTTGAAGCCTACCTTTTGGCAAATCCTGATTATTATTGA 351 0.4672 MGVVVTQEYDTPVAVPPTRLFKAMTLDFHNLFPKLVDSIHSIVVSGSALIETLEKVSFESKLEEGPNGGSIRKVRAQFFPKGDATLSEEVLNANKAKVQGLVKLVEAYLLANPDYY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0667 116 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 46 78 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0667 116 Gene3D - 3 43 IPR023393 -
Aed4g0667 116 Gene3D - 44 116 IPR023393 -
Aed4g0667 116 PANTHER PATHOGENESIS-RELATED PROTEIN 10 43 115 - -
Aed4g0667 116 PANTHER PATHOGENESIS-RELATED PROTEIN 10 1 44 - -
Aed4g0667 116 SUPERFAMILY Bet v1-like 5 116 - -
Aed4g0667 116 PRINTS Major pollen allergen Bet V1 signature 27 37 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0667 116 PRINTS Major pollen allergen Bet V1 signature 4 24 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0667 116 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Aed4g0667 116 PANTHER - 43 115 - -
Aed4g0667 116 PANTHER - 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0667 Aed-Chr4 5624655 5625447 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0667 - - gmx:100810115 176.022