Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0647 ATGGTTTGTCAAAACGACAACAACAAATGGCACCTGTTATTCCTTGCGCTTGGACTAGTGCTTTGCGTGAGCCTGAGTCCGAGCGAGGGGAGGGTGCCATTTGCATGTGACCCTAGGAACGGGCTCACGAGGGGGTTCAAGTTTTGCAACACGCACGTGCCGATCCACGTGAGGGTGCAGGACCTCATAGCGAGGCTGACATTGCCTGAGAAGATTAGGCTCGTGGTCAACAATGCCATCGCCGTGCCCAGGCTCGGAATCCAAGGCTACGAGTGGTGGTCGGAGGCGCTCCACGGCGTTTCCAACACCGGCCCCGGCACCAAGTTCGGTGGGGCCTTCCCCGGCGCCACCATGTTCCCCCAAGTCATCTCAACCGCTGCTTCGTTTAATCAGTCGCTGTGGCAGGAAATTGGACGGGTGGTGTCTGATGAAGCAAGGGCAATGTACAACGGTGGACAGGCTGGTTTGACATATTGGAGTCCTAACGTGAACATTTTCCGTGACCCGCGGTGGGGCCGCGGCCAAGAGACTCCCGGCGAGGACCCGACATTGGCAGCGAAATACGCCGCCAGCTACGTCCAAGGGCTCCAAGGCAACGGTGCCGGAAACCGCCTCAAGATTGCTGCTTGTTGTAAACACTACACTGCCTATGATCTTGATAACTGGAATGGTGTGGACAGGTTCCATTTCAACGCCAAGGTGAGTAAACAGGATTTGGAGGACACTTATGATGTACCATTTAAAGCGTGCGTTTTGGAAGGGAAAGTGGCGAGTGTGATGTGTTCCTACAATCAGGTGAATGGCAAGCCCACGTGTGCTGACCCTAATCTCCTTCGCAACACTATCCGCGGCCAATGGGGCCTCAATGGGTATATTGTCTCGGACTGTGACTCAGTTGGAGTTTTCTTTGACAACCAACACTACACAAGAACACCCGAGGAGGCAGCTGCTGAGGCCATTAAAGCGGGCCTGGACTTGGATTGTGGCCCATTCTTGGCTATCCACACCGACTCTGCCATTAGGAAGGGACTCATTTCCGAAAATGACCTTAACCTTGCCTTGGCCAACCTCATTACGGTCCAAATGAGATTGGGTATGTTCGACGGCGAACCCTCGGCCCAACCATACGGAAACTTGGGCCCAAGAGACGTTTGCACCCCGGCCCATCAACAACTTGCCCTTGAAGCTGCTAGAGAGAGTATAGTGTTGTTACAAAACAAAGGAAACTCACTACCACTATCCCCTACAAGACTCCGTACCGTAGGAGTCATAGGACCCAATGCGGACGCTTCCGTTACAATGATTGGGAACTATGCTGGTGTTGCATGTGGTTATACCACACCTTTGCAAGGGATTGCGAGGTATGTGAAGACGGCTCATCAAGTGGGGTGCAGGGGTGTGGCATGTAAGGGAAACGAACTATTTGGGGCTGCAGAGACAATAGCTAGGCAATCTGATGCGACTGTTTTGGTAATGGGCCTTGACCAGTCCATAGAAGCGGAAACAAGAGACAGGGTTGGGCTTCTCTTACCAGGCCTTCAACAAGAGCTTGTGACTAGGGTAGCCAGGGCCGCTAGGGGCCCAGTTATCTTGGTCATCATGTCTGGCGGCCCAGTTGATATCTCGTTTGCCAAATATGACCCTAAGATTAGTGCCATTTTGTGGGTTGGTTATCCTGGCCAGGCTGGGGGAACTGCCCTTGCTGATGTCATATTTGGTAGAACTAATCCAGGCGGAAGGTTACCTATGACATGGTACCCACAAGGGTATTTGGGTAAAGTGCCGATGACAAACATGGACATGCGACCAAACTCAGCAACAGGGTACCCAGGAAGAACCTACAGATTCTACAAAGGTCCAGTAGTGTTCGCATTCGGACACGGACTAAGTTACTCTAGATTCAGCCACAGTCTAGTAGCACTTGCACCCAAACAGGTCACAGTCTCAGTGCCCATAATGACCCTCCAAGCCTTAACAAACTCAAACTCAACAAGCAAAGCAGTGAAGGTCAGCCACGCCAATTGCGACGACGTCGCATTGGACATGGAGTTCCACGTGGACGTGAAAAACGAAGGCTCGATGGATGGGACCCACACAATTCTCGTATTCTCGAAACCACCCCCGGGAAAATGGTCACAAATTAAACAACTTGTGAGCTTCCACAAGACCCATGTTCCTGCTGGGTCGAAGCAACGGGTCAGGATCGGTGTTCACGCGTGCAAGCACTTGTCCGTTGTGGACCAGTTCGGGGTTCGAAGAATCCCAACCGGTGAACATGAACTCCACATTGGTGATGATGTCAAACACTCTATCTCTCTCCAAACTATGCACAATTAA 2337 0.5208 MVCQNDNNKWHLLFLALGLVLCVSLSPSEGRVPFACDPRNGLTRGFKFCNTHVPIHVRVQDLIARLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNTGPGTKFGGAFPGATMFPQVISTAASFNQSLWQEIGRVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGEDPTLAAKYAASYVQGLQGNGAGNRLKIAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLEDTYDVPFKACVLEGKVASVMCSYNQVNGKPTCADPNLLRNTIRGQWGLNGYIVSDCDSVGVFFDNQHYTRTPEEAAAEAIKAGLDLDCGPFLAIHTDSAIRKGLISENDLNLALANLITVQMRLGMFDGEPSAQPYGNLGPRDVCTPAHQQLALEAARESIVLLQNKGNSLPLSPTRLRTVGVIGPNADASVTMIGNYAGVACGYTTPLQGIARYVKTAHQVGCRGVACKGNELFGAAETIARQSDATVLVMGLDQSIEAETRDRVGLLLPGLQQELVTRVARAARGPVILVIMSGGPVDISFAKYDPKISAILWVGYPGQAGGTALADVIFGRTNPGGRLPMTWYPQGYLGKVPMTNMDMRPNSATGYPGRTYRFYKGPVVFAFGHGLSYSRFSHSLVALAPKQVTVSVPIMTLQALTNSNSTSKAVKVSHANCDDVALDMEFHVDVKNEGSMDGTHTILVFSKPPPGKWSQIKQLVSFHKTHVPAGSKQRVRIGVHACKHLSVVDQFGVRRIPTGEHELHIGDDVKHSISLQTMHN 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0647 778 PRINTS Glycosyl hydrolase family 3 signature 281 299 IPR001764 GO:0004553|GO:0005975
Aed4g0647 778 PRINTS Glycosyl hydrolase family 3 signature 207 223 IPR001764 GO:0004553|GO:0005975
Aed4g0647 778 PRINTS Glycosyl hydrolase family 3 signature 119 138 IPR001764 GO:0004553|GO:0005975
Aed4g0647 778 Gene3D - 58 375 IPR036962 GO:0004553|GO:0005975
Aed4g0647 778 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 401 634 IPR036881 GO:0004553|GO:0005975
Aed4g0647 778 SMART Fn3_like_2 698 767 IPR026891 -
Aed4g0647 778 SUPERFAMILY (Trans)glycosidases 47 400 IPR017853 -
Aed4g0647 778 Pfam Glycosyl hydrolase family 3 C-terminal domain 401 631 IPR002772 GO:0004553|GO:0005975
Aed4g0647 778 Gene3D Immunoglobulins 660 777 IPR013783 -
Aed4g0647 778 Pfam Glycosyl hydrolase family 3 N terminal domain 113 348 IPR001764 GO:0004553|GO:0005975
Aed4g0647 778 PANTHER BETA-D-XYLOSIDASE 1 11 775 - -
Aed4g0647 778 Gene3D - 387 632 IPR036881 GO:0004553|GO:0005975
Aed4g0647 778 Pfam Fibronectin type III-like domain 700 766 IPR026891 -
Aed4g0647 778 PANTHER SUGAR HYDROLASE-RELATED 11 775 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0647 Aed-Chr4 5511217 5517299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0647 17 774 Glycoside Hydrolase AT5G49360 72.142 0.0 1130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0647 - - gmx:100805839 1448.34