Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0646 ATGAGTCCAACATGGTTTTTTGTGTTGGGCGTTGCAGCATTAACGTTGGTGGTTGTTGTGAATGGACAATCACCATCACCAGTGAAGCCATTGGTGAAGACAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCATATTGCTGCAATGACACCATCTCTGACTACTTCCAAACCTACCAGTTCGAGAACCTCTTTGGAAAGCGAAACTCGCCGGTGGCTCATGCTGTTGGTTTCTGGGACTACCGTTCTTTCATCACTGCTGCTGCACTGTACCAGCCTCACGGCTTTGGCACCACTGGAGGCAAAACCAGTGGTTATGGGGTGGCTACTGGGGGACCCTTAGCCTGGGGCTTATGCTACAACAAGGAGTTGAGTCCTGATCAACTCTACTGCGATGACTACTACAAACTAACCTACCCTTGCTCTCCTGGCGCAGCATACTATGGACGTGGCGCTATCCCACTTTACTGGAACTACAACTATGGAAAAGCTGGTGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAAAATGCCACCCTAGCCTTCCAGGCTGCACTATGGCAGTGGATGACACCACCAGAGAAGCACCTACCTTCACCTCATGATGTCTTTGTTGGAACCTGGAAACCCACAAAGAATGACACATTGTCCAAAAGGGTACCTGGATTTGGTGCCACAATAAACTTGCTCTATGGGGATCAAACTTGTAGCAAGGGATCAGATAATGAAGCCATGAACAACATCATTTCTCACTATCTTTATTACCTTGATCTCTTGGGTGTTGGCAGAGAAGAGGCAGGGCCTAATGATGTTCTCTCATGTGCTGAACAAGCTCCCTTTAAGCCCTCTGGCTCACCATCTTCTGCCACTAATTGA 912 0.4836 MSPTWFFVLGVAALTLVVVVNGQSPSPVKPLVKTVKGKKVCDKGWECKGWSAYCCNDTISDYFQTYQFENLFGKRNSPVAHAVGFWDYRSFITAAALYQPHGFGTTGGKTSGYGVATGGPLAWGLCYNKELSPDQLYCDDYYKLTYPCSPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAALWQWMTPPEKHLPSPHDVFVGTWKPTKNDTLSKRVPGFGATINLLYGDQTCSKGSDNEAMNNIISHYLYYLDLLGVGREEAGPNDVLSCAEQAPFKPSGSPSSATN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0646 303 PANTHER CHITINASE-LIKE PROTEIN 1 14 296 - -
Aed4g0646 303 PIRSF Endochitinase 1 293 IPR016283 GO:0004568|GO:0005975
Aed4g0646 303 SUPERFAMILY Lysozyme-like 59 292 IPR023346 -
Aed4g0646 303 CDD chitinase_GH19 67 286 - -
Aed4g0646 303 Pfam Chitinase class I 110 276 IPR000726 GO:0004568|GO:0006032|GO:0016998
Aed4g0646 303 Gene3D - 67 292 - -
Aed4g0646 303 Gene3D Endochitinase, domain 2 129 188 - -
Aed4g0646 303 PANTHER CHITINASE-RELATED 14 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0646 Aed-Chr4 5500020 5502276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0646 15 292 Glycoside Hydrolase AT3G16920 74.747 2.50e-169 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0646 - - gmx:100809617 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0646 4 5500020 5502276 Aed4g0646 4 5500020 5502276 ECH