Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0638 ATGATGGAGGCAAAGTCACTGCTCAAGGGTTCATCTCTTTCACTTTCTTATCTCTTCCCTAAGCTTTCAAAAACCACGATGATGATAACCAACTGCGTTAGATTCAATTTCAACTATAACCCATGCCTCATTTTCGCAAATGGGTACCCTTCTTCTTCTTCTTCTTCACTGCCACTTTCTTTTCAGAACAAGCCCAGAAAATCAGCATCAGTGACTGTGAGTGCCCGTAAGAAAGACAAGAAAGAAGATACCCATAGCTCTGTGCCCAAACCTGACGAGGTCACGGGTTTCTTCCCCGAAGCTGTTCTCCTTAAAAAGAGAACGGTTGAGGAAGAAGGGAAGCTTCTCCCGGAGTTTGAAGATGCTGAAGAAAGACATCTCTTTGAAGCGCTGATGCTTGAGCTGGATAGTGATATGAATGTTGAAATATTGCGCCACTATGAGGTTATGTACTTAATTCATGAGAAGTATGAAGAAGAGGTTGCAGCTGTCAATGAGAAAATTCAAGACTTTTTGAGGGAGAAGAAAGGCCAGGTTTGGAGACTGAATGATTGGGGCATGAGAAGGCTAGCTTACAAAATACAAAAAGCCAACAATGCCCACTACATGTTGATAAACTTCGAGATGGATGCCAAATATATCAACGATTTCAAGACTCTGTTGGACCAAGATGAAAGAGAATGTAGAGCAGTTCTCTAA 699 0.4192 MMEAKSLLKGSSLSLSYLFPKLSKTTMMITNCVRFNFNYNPCLIFANGYPSSSSSSLPLSFQNKPRKSASVTVSARKKDKKEDTHSSVPKPDEVTGFFPEAVLLKKRTVEEEGKLLPEFEDAEERHLFEALMLELDSDMNVEILRHYEVMYLIHEKYEEEVAAVNEKIQDFLREKKGQVWRLNDWGMRRLAYKIQKANNAHYMLINFEMDAKYINDFKTLLDQDERECRAVL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0638 232 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 107 226 - -
Aed4g0638 232 SUPERFAMILY Ribosomal protein S6 144 226 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aed4g0638 232 Coils Coil 154 174 - -
Aed4g0638 232 Hamap 30S ribosomal protein S6 [rpsF]. 144 232 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aed4g0638 232 MobiDBLite consensus disorder prediction 72 89 - -
Aed4g0638 232 Gene3D - 144 232 IPR014717 -
Aed4g0638 232 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 107 226 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aed4g0638 232 TIGRFAM S6: ribosomal protein bS6 145 226 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aed4g0638 232 Pfam Ribosomal protein S6 146 230 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Aed4g0638 232 MobiDBLite consensus disorder prediction 68 93 - -
Aed4g0638 232 CDD bS6 146 226 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0638 - - gmx:100790128 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0638 4 5438607 5441804 Aed4g0638 4 5438607 5441804 ECH